Rahnella aquatilis HX2: Q7S_22986
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Entry
Q7S_22986 CDS
T01850
Name
(GenBank) Oligogalacturonide lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
raa
Rahnella aquatilis HX2
Pathway
raa00040
Pentose and glucuronate interconversions
raa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Q7S_22986
Enzymes [BR:
raa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
Q7S_22986
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Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
Tricorn_2nd
DPPIV_N
Motif
Other DBs
NCBI-ProteinID:
AFE60759
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Position
PRA1:55527..56708
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AA seq
393 aa
AA seq
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MAKGSQIQFNFHTVQDPQTGARVTRLTPPDVLCHRNYFYQKCFTRDGNKLLFAGEFDGNR
NYYLLDLKTQNAVQLTEGKGDNTFGGFLSPDDQYLYYVKNERSLQRVKLADFSEHTVYQV
PEEWVGYGTWVANSECTRLVGIEISREDWTPLSDWKIFQAFYHSNPHCRLLRVDLLSGKS
RVIHEKNEWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWLVNEDGSNVRKVKEHAPGESC
THEFWVPDGSALMYVSYLKGQHDRHIRRFDPQTGEDVCLMTMPACSHLMSNENGTLLVGD
GSGTPVDVKDTASHTIENDPWLYIFDAKTRQHAPLAAHNSSWQVLDGDRQGTHPHPSFSP
DDRHVLFTTDYEGLPALYLAEIPDALLSSLRKD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggttctcagattcaatttaatttccataccgttcaggaccctcagaccggt
gcgcgggtaacccgtttaacgccgcccgatgtgttgtgtcatcgcaattatttctatcag
aaatgctttacccgtgatggcaataaactgttgtttgccggtgagtttgacggcaaccgc
aactattacctgctggatttgaaaacacagaatgcggtgcaactgacggaaggcaaaggc
gataacacttttggcggtttcctctctccggacgatcagtatctttactacgtcaaaaat
gaacgtagcctgcagcgcgtaaaactggctgattttagtgagcacaccgtgtatcaggtg
ccggaagaatgggttggctacggcacctgggtggccaacagcgaatgcacccgtctggtg
ggtatcgagatcagtcgtgaggactggacgcccctgtcagactggaaaatcttccaggcg
ttttatcacagcaatccgcactgccgtctgttgcgcgtcgatttactcagcgggaaatcc
cgtgtgatccacgagaaaaacgaatggctcggacacccgatttatcgcccgtttgatgac
aacaccgtcgctttctgccacgaaggccctcacgatctggttgatgcacgcatgtggctg
gtgaatgaagacggcagcaatgtgcgtaaagtgaaagagcatgcgccaggcgaaagctgc
acacatgaattctgggtaccggacggttctgcgctgatgtatgtgtcttatctgaaaggc
cagcatgaccgccacatccgccggttcgatccgcaaactggtgaagatgtctgtctgatg
actatgccggcctgttcgcatctgatgagcaacgagaatggcacgctgctggtcggtgac
ggttccggtacgccggtagatgtgaaagatactgccagccatacgattgaaaacgatccg
tggttgtatattttcgatgccaaaacccgtcagcatgctcctctggccgcgcataacagt
tcatggcaagtgcttgatggcgaccggcaggggacgcatccgcacccatctttctcgccc
gatgaccgtcacgtgcttttcaccaccgattacgaaggcttaccggcactgtatctggcg
gaaatcccggatgccctcctcagttcattacgcaaggactaa
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