Rhodoferax antarcticus: RA876_17245
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Entry
RA876_17245 CDS
T04655
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac00061
Fatty acid biosynthesis
rac00071
Fatty acid degradation
rac01100
Metabolic pathways
rac01212
Fatty acid metabolism
rac02024
Quorum sensing
Module
rac_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RA876_17245
00071 Fatty acid degradation
RA876_17245
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA876_17245
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rac01004
]
RA876_17245
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rac04147
]
RA876_17245
Enzymes [BR:
rac01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RA876_17245
Lipid biosynthesis proteins [BR:
rac01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RA876_17245
Exosome [BR:
rac04147
]
Exosomal proteins
Exosomal proteins of breast milk
RA876_17245
Exosomal proteins of breast cancer cells
RA876_17245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
LPD22
Motif
Other DBs
NCBI-ProteinID:
APW47805
LinkDB
All DBs
Position
complement(3554224..3556170)
Genome browser
AA seq
648 aa
AA seq
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MQTTFPQLLLNHASARPADTAMREKEYGIWQAISWADMAALVEHLACGLHQAGLRQHDHM
VVIGANRPRLYATMLAVQALGAVPIALYQDAAAPECVFPINNADVAFAFAEDQEQVDKLL
EIREQCPQLGHIYFDDPRGLRKYDEPGLTAMDELMAAGKAFAAMHPDFFKQEVAKVKPDD
VAAMFFTSGTTGNPKGVVHTHDSLLNRARAGADFDKLTHKEDVLAYLPPAWIGQNIFSYA
QWLSCGYVVNCPESAATVTIDLKEIGPTYYFAPPRVFEGLLTSVMIRMEDAGAIKRKMFH
SFMELAKRVGPTLMDAKPVGTLDRLLYAIGDLMVYGPLRNNLGLSRVRVAYTAGEAIGPD
LFSFYRSIGVNLKQLYGSTETAVFVCLQPDHEARADTVGVPCAGVEIKVADNGEILVKSP
GLLKGYFKDPEATAEVLTADGWYHTSDAGFLDAHGHLKIIDRVKDVGRIKGGVFDAAMFA
PKYVENKLKFFPYIKEVVAYGDGREKVCVMINIDFEAVGNWAERRNLPYAGYTDLAQKSE
VYELIGECVEKVNADLSVDTLLAGSQVSRFLVLHKELDADDGELTRTNKVRRGFIAEKYD
ALIDALYGGKTTQFIETQVKFEDGRTGSVSATLRIDDTKTFAPVKAAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgactttcccgcagcttctgctgaaccatgccagcgctaggccggcagatacg
gccatgcgcgaaaaagagtacggtatctggcaagccatcagctgggctgacatggccgcg
ctggtggagcatttggcctgcggcctgcaccaagccgggctgcgccagcatgatcacatg
gtggtgatcggtgccaaccgcccgcgcctgtacgccaccatgctggcggtgcaggcgctg
ggtgcggtgccgattgcgctgtaccaggatgcggctgcgcccgagtgtgtgtttcccatc
aacaacgccgatgttgcctttgcctttgccgaagaccaggagcaggtagacaaactgctg
gaaatccgcgagcagtgtccgcagctgggccacatctactttgatgacccgcgtggcctg
cgcaaatacgacgagcctggcctgaccgcaatggatgagctgatggctgccggtaaagcc
ttcgccgcgatgcatcccgatttcttcaagcaggaagtggccaaggtcaaacccgatgac
gtggccgccatgtttttcaccagcggcaccaccggcaaccccaaaggcgtggtgcacacc
catgactcgctgcttaaccgtgcccgcgccggcgctgactttgacaagctgactcacaag
gaagacgtgctggcctacctgccaccggcctggatcgggcaaaacatcttcagttacgcg
cagtggctgtcttgtggctacgtggtgaactgccccgaatcggcggcaacggtgacgatc
gacctgaaagaaatcgggcccacctattactttgcgccaccgcgcgtgtttgagggcttg
ctcaccagcgtgatgatccgcatggaagacgcgggcgcgatcaagcgcaagatgtttcac
tcctttatggaactggccaaacgtgtgggcccgacgctgatggatgccaaaccggtaggc
acgctggaccggctgttgtatgccatcggcgacttgatggtctatggcccgctgcgcaac
aacctgggcttgagccgggtgcgcgtggcctacaccgcgggcgaggccattgggccggat
ttgttcagcttttaccgctccattggcgtcaacttgaagcagctctacggttccaccgag
accgcggtgtttgtctgcttgcagcccgaccatgaagcccgcgccgatacggtcggtgtg
ccgtgtgctggcgtcgagatcaaggtggccgacaacggcgagattctggtcaagtcgccg
gggctgctcaagggttacttcaaagaccccgaagccaccgccgaagtgctcaccgccgac
ggctggtaccacaccagtgacgcggggtttctggacgcgcacggtcacctgaaaatcatc
gaccgcgtcaaggacgtgggccgcatcaagggcggtgtctttgatgccgccatgtttgcg
cccaagtatgtggagaacaaactcaagttcttcccgtacatcaaagaagtggtggcctat
ggcgacggccgcgaaaaggtctgcgtgatgatcaatatcgactttgaagcggtgggcaac
tgggccgagcgacgcaacctgccctacgccggctacaccgatctggcgcaaaagtccgag
gtctacgagctcatcggcgagtgcgtggaaaaggtcaatgccgacctgagcgtcgacacc
ctgctggccggcagccaggtcagccgattcctggtgctgcacaaagagttggatgccgat
gacggggagttgacgcgcactaacaaagtgcgccgcggcttcatcgccgagaaatacgac
gcgctgattgacgccctctatggtggcaaaaccacgcagttcatcgaaacccaggtcaag
tttgaagacggccgcaccggcagtgtcagcgccacgctgcgcattgacgacaccaagacc
tttgcgccggtcaaggccgcggcctga
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