Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_1491
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Entry
RA0C_1491 CDS
T02107
Name
(GenBank) DNA mismatch repair protein muts
KO
K03555
DNA mismatch repair protein MutS
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RA0C_1491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rai03400
]
RA0C_1491
DNA repair and recombination proteins [BR:
rai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RA0C_1491
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
MauJ
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AFD56385
UniProt:
E4TAM2
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Position
1499733..1502324
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AA seq
863 aa
AA seq
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MAKAKKETPLMQQYNSIKAKYSDAILLFRVGDFYETFGADAIKTSQILGIVLTKRNNGGD
GQSIELAGFPHHSLDSYLPKLVRAGLRVAICDQLEDPKLVKGIVKRGVTELVTPGVTFND
QVLNSKKNNFLLALHKEKEKYGVALVDISTGEFLLGEGNLEKLLHIINTFEPSEIIYQRT
QEIPSQVKNKSVFKMEDWAFQYHFAYEKLTQHFKTNSLKGFGVEDHKLGITAAGAIFAYL
VEDTHHNLLNHITQIKLIPQEDYLMMDQFTLRNLEVVFPAHQNGKSLLDIIDKTATPMGG
RLLRRRLILPLKSVNEINRRLSLVEFLNNEEQLRLDVATRLKGISDLDRLMGKLAAEKIS
PKELGYLRQSLVYISEIKSLLHQYPDVLAWLNPLNHLEEVINTLENNLNEELPVNLAKGN
VIKSGVSDELDRLRGLQNSGKEYLDEMCQREIERTGIASLKINFNNVFGYYIEVRNTHKD
KVPEEWIRKQTLVNAERYITTELKEYEDQILGAEERIAILEQEIYRKVCQEVLVYIDQIQ
ENAQLIAQLDVAVGLSELSVEKGYTKPVLNDGFSIELKEARHPIIENALPLGEKYIPNDL
FLDREEQQIIMVTGPNMAGKSAILRQTAVICLLAQIGSFVPAKYASIGILDKIFTRVGAT
DNLSAGESTFMVEMNEAANILNNISDRSLILLDEIGRGTSTYDGVSIAWAIAEYLHQHPT
KPKTLFATHYHELNEMTNNFERIKNFHISIKEHKGNIIFLRKLVSGGSEHSFGIHVAKLA
GMPATVVNRANEILKTLENNRSQNDTKESIKRVTEENLQLSFFQLDDPVLENIREELTKI
DINTLTPIEAMMKLNAIKNMIGK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaagaaagaaactccactaatgcaacaatacaatagtattaaagctaaa
tactctgatgcgatattacttttcagagtaggagatttctatgaaacctttggagcagat
gccattaaaacatctcaaattttgggcattgttcttactaaaagaaataatggtggagat
ggtcagagtatagagcttgcagggtttccacatcattctttagactcctatcttccaaag
ttggtaagggcaggtcttagagtagcgatatgcgaccaattagaagatcctaaattagta
aaaggtatcgttaaaagaggcgttacggaattggtaactccaggggttacatttaatgac
caagttcttaattctaagaaaaataattttttacttgctcttcacaaggagaaggagaag
tatggcgttgctttagtggatatttctacaggagaatttttgttaggagagggcaattta
gaaaagttactacatatcatcaatacttttgaacctagcgaaattatttaccagagaact
caagaaattcctagtcaagttaaaaataaaagcgtttttaagatggaggattgggcattt
cagtatcattttgcttacgaaaagctcacgcaacatttcaaaaccaattctcttaaaggc
ttcggagtagaagaccataagctaggcattacggctgctggagctatttttgcctatttg
gtggaggatacacatcataatttactcaatcatattactcagataaaacttattccacag
gaagattatttaatgatggatcagtttacgctgagaaatttggaagtggtatttcctgca
catcaaaatgggaaaagtcttttggatattatagataaaacagccacgccaatgggcgga
agacttttgagaagaagattgatattgccacttaaatccgtaaatgaaattaacagaaga
ctctctttagttgaatttttgaataacgaggagcaactaagactagatgttgcaacaagg
cttaaaggtatttctgacttagaccgattgatgggtaaactagcggcagagaaaatctca
cctaaagaattaggttatcttaggcaaagtttagtttatatttccgagataaaatcatta
ctgcatcaatatcctgatgttttggcgtggcttaatccacttaatcatttggaggaagtt
atcaatactttagaaaataatttaaacgaagaattgcctgtaaacttagccaaaggcaat
gtgattaagtctggtgtttctgacgagctagaccgtttgagaggtttgcagaactctggt
aaagaatatctagacgagatgtgccaaagggaaatagaaagaacgggcattgctagtctg
aaaatcaattttaataatgtttttggctattatatagaagttagaaatacacataaagat
aaagttcctgaagaatggattagaaagcaaacgctagttaatgcagagagatacattaca
acagagctgaaggaatacgaagaccaaattttaggagcagaagagcgtatagccattcta
gagcaagagatttatagaaaggtatgccaagaggtacttgtttatatagaccaaattcag
gaaaacgcacaactcatcgcacagctagatgtggcggttgggctatcagagttgtctgtg
gaaaaaggctatactaaaccagtgcttaacgatggctttagtatagaactcaaagaggca
agacaccctattatagaaaatgctttgccgttaggcgaaaaatacattcctaacgatttg
tttttagaccgagaggagcaacagattattatggtaactggtcctaatatggcgggtaaa
tcggcgatattgaggcaaacggcagttatttgtcttttggctcaaatcgggagttttgtc
ccggctaaatatgcttctattggtattttagataagatatttacgagagttggggcaacg
gacaatctctctgcgggagaatcaacctttatggtggaaatgaacgaagcggctaatatc
ctcaataatatttccgaccgaagtttaattcttttagatgaaatagggcgaggtacttcc
acttatgatggcgtttctatcgcttgggctattgcggaatatttgcatcagcacccaacc
aaacctaagactttattcgccacccactaccacgagttgaatgaaatgaccaataatttt
gaaaggattaaaaacttccatatttcaattaaagaacataaggggaacattattttccta
aggaagttggtgtctggtggtagcgaacatagctttggtatccacgtggcaaaattggca
ggaatgcctgctacggtagttaatagagctaacgaaatcctaaaaactttggaaaacaac
cgctcacagaatgatacaaaagaatctattaaaagggtaacggaagaaaatttgcaactc
tcgttcttccaattagacgaccccgttttagaaaacatcagagaggaacttactaaaata
gacatcaatacactcacgcctatagaagctatgatgaagctcaatgccattaaaaatatg
ataggcaagtaa
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