Raineyella fluvialis: Rai3103_15630
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Entry
Rai3103_15630 CDS
T06259
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rain
Raineyella fluvialis
Pathway
rain00470
D-Amino acid metabolism
rain00550
Peptidoglycan biosynthesis
rain01100
Metabolic pathways
rain01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rai3103_15630
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rai3103_15630
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rai3103_15630
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rain01011
]
Rai3103_15630
Enzymes [BR:
rain01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Rai3103_15630
Peptidoglycan biosynthesis and degradation proteins [BR:
rain01011
]
Precursor biosynthesis
Amino acid ligase
Rai3103_15630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
RimK
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QGF24819
UniProt:
A0A5Q2FDC7
LinkDB
All DBs
Position
complement(3395719..3396837)
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AA seq
372 aa
AA seq
DB search
MTTPARPTVAVVFGGNSSEHGVSCLTAAGVLAAIDQERYDLVAVGITRSGRWVQLGLDEV
VALTTVDGVLPEVPEDRPDAVLARTPDGARIASIDGDRLVDVHDIDLAFSLLHGPMGEDG
TIQGLFEMYGIRYVGSGVTASAVAMDKIRMKQVMALSALPIGPWVGIRPADWAADPEACL
ESISALRFPVYVKPARGGSSVGITRVEDPAGLRDAIAEAQRWDPRVIVEEGVVQAREIEC
GVLQDPAGGRPQASVVAEIEMHNASGFYDFDAKYLPEEQVSLHVPADLDPAVAAEVREVA
IRVFEAFDCEGLARVDCFLTHDNTVLVNELNTMPGFTRFSMFPQVWAAAGVAYPDLIDRL
IELALCRPVGLR
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacccgctcgcccgaccgtcgccgtcgtcttcggtggcaacagctccgagcac
ggggtgtcgtgcctgaccgccgccggagtgctggccgcgatcgatcaggaacgctacgac
ctggtggccgtgggcatcacccgttccggccggtgggtccagctggggctcgacgaggtg
gtggccttgacgaccgtcgacggcgtcctgccggaggtccccgaggaccggcccgacgcc
gtgctggcccggacgccggacggcgcccggatcgcatcgatcgacggcgaccgactcgtc
gatgtccacgacatcgacctggcgttctcgctgctgcacggaccgatgggcgaggacggc
accatccagggcctcttcgagatgtacggcatccgctacgtcggctccggggtgacggcc
agcgcggtggccatggacaagatccggatgaagcaggtgatggccctcagcgccctgccg
atcggcccctgggtcgggatccggccggcggactgggccgccgatccggaagcctgcctg
gagtccatctcggccctgcggttcccggtctacgtcaagccggcccgaggcggctccagc
gtcggtatcaccagggtcgaggatcccgccggcctgcgcgacgcgatcgccgaggcgcag
cgctgggatccgcgggtgatcgtcgaggagggcgtcgtccaggcgcgcgagatcgagtgc
ggcgtcctccaggacccggcaggcggtcggccccaggcctccgtggtggccgagatcgag
atgcacaacgcctcgggcttctacgacttcgacgcgaagtaccttcccgaggagcaggtc
agtctgcacgtgcccgcggatctcgatccggccgtcgcggccgaggtgcgcgaggtggcg
atccgcgtcttcgaggcgttcgactgtgaaggcctcgcccgggtcgactgcttcctcacc
catgacaacaccgttctggtgaacgagctcaacacgatgcccggcttcacccggttctcg
atgttcccgcaggtctgggcggcggccggagtggcctaccccgacctgatcgaccggctc
atcgaactggccctgtgccggcccgtcgggctgcgctga
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