Ruminococcus albus: Rumal_0446
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Entry
Rumal_0446 CDS
T01387
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
ral
Ruminococcus albus
Pathway
ral03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ral00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rumal_0446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ral03400
]
Rumal_0446
DNA repair and recombination proteins [BR:
ral03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rumal_0446
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Rumal_0446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
AAA_16
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
ADU20999
UniProt:
E6UFB3
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Position
488828..490798
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AA seq
656 aa
AA seq
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MDRFQLVSDYKLSGDQPEAVDALVKGVESGMKEQTLLGVTGSGKTFTMANVIERLNRPTL
VLAHNKILAAQLCSEFKEFFPNNAVEYFVSYYDYYQPEAYVPSTDVYIEKDSSINDEIDK
LRHSATTAITERRDVIIVASVSCIYSLGDPSEYKSMVVSIRKGAEKSRDELIAELVKIQY
ERNDINFVRNKFRVRGDVVEIFPADSTDKALRVEFFGDEIDRICEVNVLTGEVLSTLNHA
AVFPASHYIVGREKMLDAIDEIKEELAERVKCFEDRGMLIEAQRIQQRTNYDMEMLEEIG
FCSGIENYSRVLARRSKGAVPFTLFDFMPDDFLLMVDESHVSLPQVRGMFAGDRARKQTL
VDYGFRLPSALDNRPLQFDEFYERINQAIFVSATPGPIEKEKSQQIVEQVIRPTGLLDPL
ISVRPTDGQIEDLLGEINKRVEKGQRVLVTTLTKKMAEDLTAYLKGFDVKVRYMHHDIDT
IERMEIIRDLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSESSLIQTIGRA
ARNSEGMVIMYADSVTRSMESAIRETERRRAIQEKYNEEHGIVPKTIVKDIRDVIEISTK
EEAEYSARQAVKLSKAEQQKLIDKLTREMKEAAKLLEFEHAAFLRDRIAELKGEKK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtggatagattccaactggtttcggattataagctttccggcgatcagcctgaagcagtg
gatgctctggtaaagggcgtagaatcgggtatgaaggagcagacgcttctgggcgttacg
ggctcgggcaagacttttactatggctaatgttatcgagcggttaaaccgtccgaccctt
gtacttgctcataacaagatacttgcggcacagctttgttcggagttcaaggagtttttc
ccgaacaatgcggtggagtattttgtaagctactacgattactaccagcccgaagcctat
gttcccagtacagatgtgtacatagaaaaggacagttctattaacgatgagatagataag
ctgcgtcattctgctactacggctataaccgaaaggcgggatgttataatagtagccagt
gtttcatgcatatactcccttggtgatccgtcagagtataagtccatggtggtaagtata
cgcaagggagctgaaaaatcacgtgatgagcttattgcggagcttgtgaagatacagtac
gagcgaaacgacatcaattttgtaagaaataagttccgtgtaaggggcgacgtggttgag
atattccctgcggattccacggataaggcgctgagagtcgagttcttcggagatgagatc
gaccgtatatgcgaggtgaacgtgctgactggggaagtgctctcaacgctgaatcacgct
gctgtttttcctgcatctcattatatcgtcggccgcgagaaaatgctggatgctatcgac
gagataaaggaagaacttgctgaacgtgtgaaatgcttcgaggacagaggtatgctgata
gaagcacagcgtatacagcagaggacgaattacgatatggagatgctggaggagataggc
ttctgcagcggaatagaaaactattcccgcgtactggcaagacgttcaaagggtgctgta
cctttcacgctgtttgacttcatgccggatgattttctgcttatggtggacgaatctcac
gtttcactgccgcaggtaaggggaatgttcgcaggggacagggcgcgtaagcagactctg
gtggattacggttttcgtctgccctcggcactggataaccgccctttgcagttcgatgaa
ttttacgagcgcataaatcaggctatatttgtatcagctaccccgggacccatagaaaaa
gaaaagtcgcagcagatagtggaacaggtgataagacctacaggacttctcgatccgctg
atatccgtaagacctaccgatggtcagatagaggatctgcttggcgagataaacaaaagg
gtagagaaaggtcagcgtgtgcttgtgactacgctcacaaaaaagatggctgaagatctt
actgcctatctgaagggctttgatgttaaggtgcggtatatgcaccatgatattgatacc
attgagcgtatggagataatacgcgatcttcgtctgggcgagtttgatgtgcttgttggt
atcaaccttctgagagagggtcttgatctgcccgaggtttcacttgttgcgatactcgat
gctgacaaggagggcttcctgcgttcggaaagttcgcttatccagaccataggcagagcg
gcaagaaactcggaaggtatggtaataatgtatgccgacagcgtgacacgctcgatggag
agtgccatacgtgagactgaaagacgacgtgctatacaggaaaaatataatgaggaacac
ggcatagttcccaagaccatagtcaaggatataagagatgtcattgagatatccacaaag
gaagaagcggagtattccgcaagacaggctgtgaagctttcgaaggcagaacagcagaag
cttatagataagctgacccgcgagatgaaagaagctgcgaagcttcttgaatttgagcac
gcagcattcctgcgtgacaggatagctgaactcaaaggggagaaaaagtga
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