Rothia amarae: IDM48_07155
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Entry
IDM48_07155 CDS
T06930
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rama
Rothia amarae
Pathway
rama03030
DNA replication
rama03430
Mismatch repair
rama03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IDM48_07155 (dnaE)
03430 Mismatch repair
IDM48_07155 (dnaE)
03440 Homologous recombination
IDM48_07155 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rama03032
]
IDM48_07155 (dnaE)
03400 DNA repair and recombination proteins [BR:
rama03400
]
IDM48_07155 (dnaE)
Enzymes [BR:
rama01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IDM48_07155 (dnaE)
DNA replication proteins [BR:
rama03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IDM48_07155 (dnaE)
DNA repair and recombination proteins [BR:
rama03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IDM48_07155 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
QNV39196
UniProt:
A0A7H2BHQ0
LinkDB
All DBs
Position
complement(1509616..1513155)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSGKGFTHLHVHTEYSMLDGAARITDLFDHAKDLGMGAVATTDHGYLFGAFDFWNKAQQA
DIKPIIGVEAYVTPGTHRTDRTRIRWGEDAGRDDVSGGGAYTHMTLWAETTQGMHNLFRA
SSLASLEGHFYKPRMDKELLQTYGKGLIATTGCPSGEIQTRLRLGQYDAAIQAASDYRDI
FGKENYYCEIMDHGLGIEKNVMTDLHRVAKQLNLPLVATNDLHYTHAEDAKAHAALLCVQ
SGSTLQDPKRFKFDADEFYLKSPEEMRHLFRDFPEACDNTMEIAERCHVEFNTNANYMPD
FPTPEGENEESWFVKEVERGLHYRFPEGIPDDVRKQADYEVGIITQMGFPGYFLVVADFI
NWAKNNGIRVGPGRGSGAGSMVAYAMRITELNPLQHDLIFERFLNPDRVSMPDFDVDFDD
RRRSEVIHYVTEKYGEDKVAMIVTYGTIKAKQALKDSSRVLGYPFSTGERLTKAMPDDVM
GKNIALANVYNEEDKRYSDAKDLRELIETDPDSAKVFETAKGIEGLKRQWGVHAAGVIMS
SHDLLDVIPVMRREQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISDAISNIKLNRDF
DLDLEGLDIDDKGSYDLLARGDTLGVFQLDGGPMRSLLRLMRPDNFEDISATIALYRPGP
MGANSHTNYALRKNGQQEITPIHPELEEPLKEILGTTYGLIVYQEQVMAIAQKVAGYSLG
QADILRRAMGKKKKAELDKQYEGFHQGMIDRGYSEAAIKSLWDILLPFSDYAFNKAHSAA
YGLVSYWTAYLKAHYPQEYMAALLTSVGDDKDKLALYLNECRHMKITVLPPDVNESELNF
TPVGEDIRFGMGAIRNVGANVVNAMVQSRKEKGRFESFHDFLKKVPAVVCNKRTIDSLIK
AGAFDDLGHIRRALSMIHEEAVDSNVSVKRQEAAGQFDLFGGMGMDDDDPSTDLMVTIPD
VPEWDKRDKLNFEREMLGLYVSDHPLRGIEDQLDALSDSSVQGLLAEDSHKPDGAVVTVA
GMITSVSRRVAKSSGNPYARIELEDRTGSIEVMFFGRAYEPIAPVLSEDLICTIKGRLQR
RDDGSTTISAQELNLPEISADGTSGPVVIAIPEFKATEETLGELRSILRNHRGESEVRIA
MNTRTKRIVMRLGADLRVQPNPALFGDLKVLLGPACLDV
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
ttgagtggaaaaggcttcacccacctgcacgtacacaccgaatactcgatgttggacggt
gcagctcgcattactgatcttttcgaccatgcaaaagatttggggatgggggctgttgct
accacagaccatgggtatctcttcggtgcctttgatttttggaacaaggcacaacaggct
gatatcaagccgattatcggcgtcgaagcttatgtcactcctggcactcaccgcactgac
cgtacccgtattaggtggggtgaagacgccggccgtgacgacgtctctggtggcggtgcc
tatacgcatatgaccctgtgggctgagaccactcagggcatgcataatctcttccgtgcg
tcgtccctggcatcattggaggggcatttttataagccccgtatggacaaagaattgttg
cagacttacggcaaggggctgattgctaccaccggttgcccctcgggcgagattcagact
cgtttgcgcttgggacagtacgacgctgcgattcaggctgcttcggactaccgcgatatt
ttcggcaaagaaaattactactgcgaaatcatggatcacggtctcggcattgagaagaac
gtgatgaccgatctgcaccgggttgccaaacagctcaatttgccgttggtcgcgactaac
gatttgcactacacacacgctgaagacgccaaagcgcacgccgcactattgtgtgtgcag
tcaggatccactcttcaggatcccaagcgcttcaaatttgatgccgatgagttctacttg
aaatcgcccgaggaaatgcgccacctcttccgtgatttccctgaagcctgcgataacact
atggaaatcgctgagcgttgccacgttgaattcaacacaaacgcaaactacatgcccgat
ttccccaccccggagggggagaatgaggaatcctggttcgtcaaagaagttgaacgcggt
ttacactaccgattccccgagggcattcccgatgacgtacgcaagcaggcagattatgaa
gtagggattattacccagatgggatttcccggctacttcttggtggtcgccgactttatc
aactgggcgaagaataacggaattcgagtgggccccgggcgtggttcaggtgcgggttcc
atggtggcgtatgccatgcgcattaccgagctgaatccgttgcagcacgaccttatcttc
gagcgcttcctcaaccctgaccgcgtttctatgcccgacttcgacgtcgacttcgatgat
cgccgtcgttctgaggtgatccactatgtgaccgaaaagtacggcgaagacaaagtggca
atgattgtcacctacggcaccatcaaggcgaagcaggcgttaaaggactcttcccgcgtg
ctgggctatcccttctccaccggtgagcgtctgaccaaggcaatgcccgatgacgtgatg
ggtaagaacattgcgctggcaaacgtctacaacgaagaagataaacgctattccgatgcc
aaagatctgcgtgaactcattgaaactgaccccgattcagcgaaggtttttgagaccgct
aagggcattgagggtctgaaacgccagtggggcgtgcacgctgcgggcgttattatgtcc
agccacgatttgctggatgttattcccgtgatgcgccgtgagcaagacggccaggtaatc
acgcagtttgattaccccacctgtgaaggcctggggcttatcaagatggactttttgggc
ttgcgtaacctcaccatcatttctgatgctatttcgaacattaagctcaaccgcgatttt
gatttggatcttgaggggctcgatatagacgacaagggttcctatgatttgctagcgcgc
ggcgataccttgggagttttccagctcgacggcgggcctatgcgttccttgctgcgtttg
atgcgcccggataacttcgaagatatttcggcgacaatcgcgctttaccgaccggggccc
atgggcgctaactcgcatacgaattatgcgttgcgtaagaacgggcagcaggaaatcacg
cctatccaccctgagctggaggagccactcaaagaaattctaggcaccacctacggtctg
attgtgtatcaggagcaggtgatggctatcgcccagaaggttgctggctactcgctgggc
caggcggatattttgcgccgtgcgatgggtaagaagaaaaaggcagagctggacaaacag
tacgagggtttccaccagggcatgattgaccgtggttactctgaggctgctatcaagtcc
ctctgggacatcctgcttccgttctctgactatgcgtttaacaaggcgcactcagccgcc
tacggtttggtgtcgtactggactgcctatttgaaggctcactatccgcaggaatatatg
gcggcgttgctgacctcggtgggcgatgataaggacaagctggcgctatatctgaacgag
tgccggcacatgaaaattaccgttttgccgccggatgtcaatgagtcagaactgaacttt
acacctgttggcgaggatattcgctttggtatgggtgctatccgaaacgtcggtgccaat
gtggtgaacgcgatggttcagtcgcgtaaagaaaagggtcgctttgagtctttccacgac
ttcttgaagaaggttcccgctgtcgtctgtaataagcgtacgattgattcgctcattaaa
gcgggcgcgtttgacgatttgggacatatccgccgggcgttgtccatgattcatgaagaa
gcagtggactcgaatgtgtcggtcaagcgccaggaagcagcggggcagtttgacctcttt
ggcggtatggggatggatgacgacgatcccagcaccgatttgatggtgactatccctgac
gtacccgagtgggataagcgcgacaaactcaactttgagcgcgagatgctcggtctctat
gtgtccgatcacccgctacgcggtattgaggatcagcttgatgcgctatcggattcttcg
gtgcagggtcttttggcagaggattctcataaacctgatggcgccgtggtcacggtggct
ggcatgattacttcggtatctcgtcgcgtggcgaaatcctcgggtaacccttacgcccgt
atcgagctggaagaccgcacaggttccattgaagttatgttctttggccgcgcttacgag
cctattgcaccggtgctttcagaagatttgatttgtactatcaagggccgcctgcaacgt
cgagacgatggctcgacgaccattagtgcgcaggaactgaacctccccgagatttctgcc
gacggcacctcgggcccggttgttatcgccattcccgaattcaaagcaacagaggagact
ctgggggagttgcgctctatcttgcgcaatcaccgcggcgaatcagaagttcggattgct
atgaatacgcgaacaaagcggattgtcatgcgtttgggcgccgacttgcgagttcagccc
aatcccgccctctttggggacctcaaagttctgttggggccggcatgcctagacgtttag
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