KEGG   Rothia amarae: IDM48_07155
Entry
IDM48_07155       CDS       T06930                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
rama  Rothia amarae
Pathway
rama03030  DNA replication
rama03430  Mismatch repair
rama03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rama00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IDM48_07155 (dnaE)
   03430 Mismatch repair
    IDM48_07155 (dnaE)
   03440 Homologous recombination
    IDM48_07155 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rama03032]
    IDM48_07155 (dnaE)
   03400 DNA repair and recombination proteins [BR:rama03400]
    IDM48_07155 (dnaE)
Enzymes [BR:rama01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IDM48_07155 (dnaE)
DNA replication proteins [BR:rama03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IDM48_07155 (dnaE)
DNA repair and recombination proteins [BR:rama03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IDM48_07155 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C DUF655
Other DBs
NCBI-ProteinID: QNV39196
UniProt: A0A7H2BHQ0
LinkDB
Position
complement(1509616..1513155)
AA seq 1179 aa
MSGKGFTHLHVHTEYSMLDGAARITDLFDHAKDLGMGAVATTDHGYLFGAFDFWNKAQQA
DIKPIIGVEAYVTPGTHRTDRTRIRWGEDAGRDDVSGGGAYTHMTLWAETTQGMHNLFRA
SSLASLEGHFYKPRMDKELLQTYGKGLIATTGCPSGEIQTRLRLGQYDAAIQAASDYRDI
FGKENYYCEIMDHGLGIEKNVMTDLHRVAKQLNLPLVATNDLHYTHAEDAKAHAALLCVQ
SGSTLQDPKRFKFDADEFYLKSPEEMRHLFRDFPEACDNTMEIAERCHVEFNTNANYMPD
FPTPEGENEESWFVKEVERGLHYRFPEGIPDDVRKQADYEVGIITQMGFPGYFLVVADFI
NWAKNNGIRVGPGRGSGAGSMVAYAMRITELNPLQHDLIFERFLNPDRVSMPDFDVDFDD
RRRSEVIHYVTEKYGEDKVAMIVTYGTIKAKQALKDSSRVLGYPFSTGERLTKAMPDDVM
GKNIALANVYNEEDKRYSDAKDLRELIETDPDSAKVFETAKGIEGLKRQWGVHAAGVIMS
SHDLLDVIPVMRREQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISDAISNIKLNRDF
DLDLEGLDIDDKGSYDLLARGDTLGVFQLDGGPMRSLLRLMRPDNFEDISATIALYRPGP
MGANSHTNYALRKNGQQEITPIHPELEEPLKEILGTTYGLIVYQEQVMAIAQKVAGYSLG
QADILRRAMGKKKKAELDKQYEGFHQGMIDRGYSEAAIKSLWDILLPFSDYAFNKAHSAA
YGLVSYWTAYLKAHYPQEYMAALLTSVGDDKDKLALYLNECRHMKITVLPPDVNESELNF
TPVGEDIRFGMGAIRNVGANVVNAMVQSRKEKGRFESFHDFLKKVPAVVCNKRTIDSLIK
AGAFDDLGHIRRALSMIHEEAVDSNVSVKRQEAAGQFDLFGGMGMDDDDPSTDLMVTIPD
VPEWDKRDKLNFEREMLGLYVSDHPLRGIEDQLDALSDSSVQGLLAEDSHKPDGAVVTVA
GMITSVSRRVAKSSGNPYARIELEDRTGSIEVMFFGRAYEPIAPVLSEDLICTIKGRLQR
RDDGSTTISAQELNLPEISADGTSGPVVIAIPEFKATEETLGELRSILRNHRGESEVRIA
MNTRTKRIVMRLGADLRVQPNPALFGDLKVLLGPACLDV
NT seq 3540 nt   +upstreamnt  +downstreamnt
ttgagtggaaaaggcttcacccacctgcacgtacacaccgaatactcgatgttggacggt
gcagctcgcattactgatcttttcgaccatgcaaaagatttggggatgggggctgttgct
accacagaccatgggtatctcttcggtgcctttgatttttggaacaaggcacaacaggct
gatatcaagccgattatcggcgtcgaagcttatgtcactcctggcactcaccgcactgac
cgtacccgtattaggtggggtgaagacgccggccgtgacgacgtctctggtggcggtgcc
tatacgcatatgaccctgtgggctgagaccactcagggcatgcataatctcttccgtgcg
tcgtccctggcatcattggaggggcatttttataagccccgtatggacaaagaattgttg
cagacttacggcaaggggctgattgctaccaccggttgcccctcgggcgagattcagact
cgtttgcgcttgggacagtacgacgctgcgattcaggctgcttcggactaccgcgatatt
ttcggcaaagaaaattactactgcgaaatcatggatcacggtctcggcattgagaagaac
gtgatgaccgatctgcaccgggttgccaaacagctcaatttgccgttggtcgcgactaac
gatttgcactacacacacgctgaagacgccaaagcgcacgccgcactattgtgtgtgcag
tcaggatccactcttcaggatcccaagcgcttcaaatttgatgccgatgagttctacttg
aaatcgcccgaggaaatgcgccacctcttccgtgatttccctgaagcctgcgataacact
atggaaatcgctgagcgttgccacgttgaattcaacacaaacgcaaactacatgcccgat
ttccccaccccggagggggagaatgaggaatcctggttcgtcaaagaagttgaacgcggt
ttacactaccgattccccgagggcattcccgatgacgtacgcaagcaggcagattatgaa
gtagggattattacccagatgggatttcccggctacttcttggtggtcgccgactttatc
aactgggcgaagaataacggaattcgagtgggccccgggcgtggttcaggtgcgggttcc
atggtggcgtatgccatgcgcattaccgagctgaatccgttgcagcacgaccttatcttc
gagcgcttcctcaaccctgaccgcgtttctatgcccgacttcgacgtcgacttcgatgat
cgccgtcgttctgaggtgatccactatgtgaccgaaaagtacggcgaagacaaagtggca
atgattgtcacctacggcaccatcaaggcgaagcaggcgttaaaggactcttcccgcgtg
ctgggctatcccttctccaccggtgagcgtctgaccaaggcaatgcccgatgacgtgatg
ggtaagaacattgcgctggcaaacgtctacaacgaagaagataaacgctattccgatgcc
aaagatctgcgtgaactcattgaaactgaccccgattcagcgaaggtttttgagaccgct
aagggcattgagggtctgaaacgccagtggggcgtgcacgctgcgggcgttattatgtcc
agccacgatttgctggatgttattcccgtgatgcgccgtgagcaagacggccaggtaatc
acgcagtttgattaccccacctgtgaaggcctggggcttatcaagatggactttttgggc
ttgcgtaacctcaccatcatttctgatgctatttcgaacattaagctcaaccgcgatttt
gatttggatcttgaggggctcgatatagacgacaagggttcctatgatttgctagcgcgc
ggcgataccttgggagttttccagctcgacggcgggcctatgcgttccttgctgcgtttg
atgcgcccggataacttcgaagatatttcggcgacaatcgcgctttaccgaccggggccc
atgggcgctaactcgcatacgaattatgcgttgcgtaagaacgggcagcaggaaatcacg
cctatccaccctgagctggaggagccactcaaagaaattctaggcaccacctacggtctg
attgtgtatcaggagcaggtgatggctatcgcccagaaggttgctggctactcgctgggc
caggcggatattttgcgccgtgcgatgggtaagaagaaaaaggcagagctggacaaacag
tacgagggtttccaccagggcatgattgaccgtggttactctgaggctgctatcaagtcc
ctctgggacatcctgcttccgttctctgactatgcgtttaacaaggcgcactcagccgcc
tacggtttggtgtcgtactggactgcctatttgaaggctcactatccgcaggaatatatg
gcggcgttgctgacctcggtgggcgatgataaggacaagctggcgctatatctgaacgag
tgccggcacatgaaaattaccgttttgccgccggatgtcaatgagtcagaactgaacttt
acacctgttggcgaggatattcgctttggtatgggtgctatccgaaacgtcggtgccaat
gtggtgaacgcgatggttcagtcgcgtaaagaaaagggtcgctttgagtctttccacgac
ttcttgaagaaggttcccgctgtcgtctgtaataagcgtacgattgattcgctcattaaa
gcgggcgcgtttgacgatttgggacatatccgccgggcgttgtccatgattcatgaagaa
gcagtggactcgaatgtgtcggtcaagcgccaggaagcagcggggcagtttgacctcttt
ggcggtatggggatggatgacgacgatcccagcaccgatttgatggtgactatccctgac
gtacccgagtgggataagcgcgacaaactcaactttgagcgcgagatgctcggtctctat
gtgtccgatcacccgctacgcggtattgaggatcagcttgatgcgctatcggattcttcg
gtgcagggtcttttggcagaggattctcataaacctgatggcgccgtggtcacggtggct
ggcatgattacttcggtatctcgtcgcgtggcgaaatcctcgggtaacccttacgcccgt
atcgagctggaagaccgcacaggttccattgaagttatgttctttggccgcgcttacgag
cctattgcaccggtgctttcagaagatttgatttgtactatcaagggccgcctgcaacgt
cgagacgatggctcgacgaccattagtgcgcaggaactgaacctccccgagatttctgcc
gacggcacctcgggcccggttgttatcgccattcccgaattcaaagcaacagaggagact
ctgggggagttgcgctctatcttgcgcaatcaccgcggcgaatcagaagttcggattgct
atgaatacgcgaacaaagcggattgtcatgcgtttgggcgccgacttgcgagttcagccc
aatcccgccctctttggggacctcaaagttctgttggggccggcatgcctagacgtttag

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