Rothia amarae: IDM48_08650
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Entry
IDM48_08650 CDS
T06930
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rama
Rothia amarae
Pathway
rama00521
Streptomycin biosynthesis
rama00523
Polyketide sugar unit biosynthesis
rama00525
Acarbose and validamycin biosynthesis
rama00541
O-Antigen nucleotide sugar biosynthesis
rama01100
Metabolic pathways
rama01110
Biosynthesis of secondary metabolites
rama01250
Biosynthesis of nucleotide sugars
Module
rama_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rama00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
IDM48_08650 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IDM48_08650 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
IDM48_08650 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IDM48_08650 (rfbB)
00525 Acarbose and validamycin biosynthesis
IDM48_08650 (rfbB)
Enzymes [BR:
rama01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
IDM48_08650 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Sacchrp_dh_NADP
adh_short
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
QNV39445
UniProt:
A0A7H2BIE9
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Position
complement(1854738..1855736)
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AA seq
332 aa
AA seq
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MGKILVTGGAGFIGSNFVHHLLENTDHSVTVLDKMTYAANEKSLEGLDPSRFELVKGDIA
DRNTVDPLVDEADAVVHYAAESHNDNSLNDPTPFIHTNLIGTFTLLEAVREYKTRYHHIS
TDEVFGDLELDDPAKFTEKTPYNPSSPYSSTKAGSDLLVRAWMRSFGIEATISNCSNNYG
PFQHIEKFIPRQITNILSGIRPKLYGEGLNVRDWIHASDHSSAVLTILEKGKLGETYLIG
ANGEENNITVLRTILRLMGQPEDAFDHVVDRPGHDLRYAIDGSRLREELGWEPRFTNFES
GLENTIEWYAENRDWWEPLKAEVEAKYSKVGQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatcttagtgaccggcggagccggcttcatcggttcaaactttgttcaccac
cttctagagaacacagaccattctgtgacggtgctcgataagatgacgtacgcagctaac
gagaagtctttggaggggctggacccttcgcgatttgaattagttaagggggacatcgca
gaccgaaatactgtagaccccttggtggacgaagccgatgccgttgtccactacgccgca
gaatcccacaacgataactctctgaacgatcccacgccgttcatccataccaatctcatc
ggaacttttaccctgttagaagccgtacgtgagtataagactcgctaccatcacatctcc
accgacgaggtgtttggtgatttagaactggatgaccccgccaaattcacggaaaaaact
ccctacaatccgtcgtcgccctattcatctactaaggcggggtcagatcttctcgtgcgc
gcgtggatgcgctcgttcggcatcgaggcaactatctctaactgctcgaataactacggg
cctttccagcacatcgaaaaatttattccccgccaaatcaccaatattctttcgggtatt
aggcccaagttgtatggagaagggttgaacgttcgtgactggatccacgcctcggatcac
tcctctgcggtgctgactatcttggaaaaaggcaagctgggggagacctatctcattggt
gccaacggcgaagaaaataacatcacggtattgcgcactatcttgcgcctgatgggtcag
cccgaagacgcttttgaccatgtagttgaccgccccgggcatgatttgcggtacgccatc
gatggctctcggctgagagaagagctggggtgggagccacgatttaccaattttgagtcg
gggttggaaaacacgatcgaatggtacgccgagaaccgagactggtgggaacctctcaaa
gctgaggttgaagctaaatattccaaggtaggccagtaa
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