Rhodococcus antarcticus: RHODO2019_07925
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Entry
RHODO2019_07925 CDS
T09186
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rant
Rhodococcus antarcticus
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rant03051
]
RHODO2019_07925 (pafA)
Enzymes [BR:
rant01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
RHODO2019_07925 (pafA)
Proteasome [BR:
rant03051
]
Prokaryotic proteasome
Bacterial regulatory particles
RHODO2019_07925 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UZJ26319
UniProt:
A0ABY6P3T2
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All DBs
Position
1651979..1653337
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AA seq
452 aa
AA seq
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MERRIMGIETEFGVTCTFKGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDDLVQLVSHDKAGERILEDLLVDAEQRLAEEGIGGDIFLFKNNTDSAGNSY
GCHENFLVARQGEFSRISDVLLPFLVTRQLIAGAGKVLQTPRGSTFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMVKVGSAALVLEMIEAGVAF
RDFSLDNPIRAIREISHDLTGRRPVRLAGGREASALDIQREYHAKAVEHLVNRTPDPTMT
RVVELWGRTLDAVETSTPSLVDTEIDWAIKQKLFQRYQDKHGMDLSDPRIAQLDLTYHDI
RRGRGVFDLLQRKGLAARVTTDEDITTAEQTPPQTTRAKLRGEFISAAQDAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgacgcatcatgggtatcgagaccgagttcggcgtcacgtgcaccttcaagggg
caacggcgcctgagccccgacgaggtggcgcgctacctgttccgccgggtggtgtcctgg
ggacgcagctcgaacgtgttccttcgcaacggggcccggctctacctcgacgtcggctcg
caccccgagtacgccaccgcggagtgcgacgacctggtccagctggtcagccacgacaag
gccggggagcgcatcctcgaggacctgctggtcgacgccgagcagcgcctggccgaggag
ggcatcggcggggacatcttcctgttcaagaacaacaccgactccgccggcaactcctac
ggctgccacgagaacttcctcgtcgcgcggcagggcgagttctcccgcatctccgacgtg
ctgctgcccttcctggtcacccgccagctcatcgcgggcgcgggaaaggtgctgcagacc
ccgcgcgggtccaccttctgcctgagccagcgcgccgagcacatctgggagggcgtgtcc
tccgccaccacgcgcagccggcccatcatcaacaccagggacgagccgcacgccgacgcg
gagaagtaccgccgcctgcacgtcatcgtcggcgactcgaacatgtccgagacgaccacc
atggtgaaggtgggttccgccgccctcgtgctggagatgatcgaggccggcgtcgccttc
cgggacttctccctggacaaccccatccgcgccatccgggagatcagccacgacctcacc
ggtcgccgccccgtccgcctggccggcggtcgcgaggccagcgccctggacatccagcgc
gagtaccacgccaaggccgtcgagcacctcgtcaaccgcactccggaccccacgatgacc
cgggtggtcgagctgtggggccgcaccctggacgcggtggagaccagcacaccgtcgctg
gtcgacaccgagatcgactgggccatcaagcagaagctgttccagcgctaccaggacaag
cacgggatggacctctcggacccccggatcgcccagctcgacctcacctaccacgacatc
cgccgcggccgtggggtgttcgacctgttgcagcgcaagggcctcgccgctcgtgtcacc
accgacgaggacatcaccacggccgagcagaccccgccgcagacgacgagggcaaagctg
cgcggggagttcatctccgccgcgcaggacgccggccgcgacttcaccgtcgactgggtg
cacctgaagctgaacgaccaggcccagcgcacggtgctctgcaaggacccgttccgatcg
gtggacgagcgcgtggagcgcctcatcgcctccatgtag
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