Raoultella sp. X13: DSD31_19940
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Entry
DSD31_19940 CDS
T05540
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rao
Raoultella sp. X13
Pathway
rao00900
Terpenoid backbone biosynthesis
rao01100
Metabolic pathways
rao01110
Biosynthesis of secondary metabolites
Module
rao_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
DSD31_19940
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rao01006
]
DSD31_19940
Enzymes [BR:
rao01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
DSD31_19940
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
DSD31_19940
Prenyltransferases [BR:
rao01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
DSD31_19940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF883
UbiA
Arm-DNA-bind_3
Motif
Other DBs
NCBI-ProteinID:
AXC31583
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All DBs
Position
4194534..4195433
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AA seq
299 aa
AA seq
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MDFSQQLHACVEQANDALRRFLAPLPFQNTPLVEAMQYGALLGGKRLRPFLVYATGEMFG
VSRTTLDAPAAAVECIHAYSLMHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTL
AFSILSDAPMPEVPDSDRLAMVSTLAHASGVAGMCGGQALDLEAEGHQVDLQALERIHRH
KTGALICAAVRMGALSAGERGRAALPALDRYAQNIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARKKAHDLIEDARQSLSELAAQSLDTTALEALANYIIQRDK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcgcaacaattacacgcttgcgttgagcaggccaacgacgcgctacgccgt
ttcctcgctccgctgccttttcagaacactccactggttgaagccatgcagtacggcgca
ctattaggcggtaaacgcctgcgtccgttcctcgtctatgctaccggcgaaatgttcggc
gtcagccggacaacgctggacgcaccggccgccgccgttgaatgcatccatgcttactct
ctgatgcatgacgatctgcccgccatggacgatgacgatctgcgccgcggtctgccgacc
tgccacattaaatttggcgaagcgaacgcaattcttgccggagacgccctacaaacgctg
gcattttctatactgagtgatgcgccgatgcctgaagtgccggacagcgatcgtctggcg
atggtttcgacgctggctcacgccagcggcgtcgccggaatgtgcggcggacaggcgctg
gatctggaagccgaaggccaccaggttgacctgcaggcgctggagcgtattcatcgccac
aaaaccggcgcgctgatatgcgccgcggtgcgcatgggcgcgctgagcgcaggtgaacgc
ggtcgtgcggccctgccggcgctcgatcgctatgcgcaaaatatcggtctcgccttccag
gtccaggatgacattcttgacgtggtaggggatactgcgacccttggcaaacgtcaggga
gctgaccagcagctaggcaaaagtacttatcctgcgcttctgggacttgaacaagcgcgt
aaaaaagcgcacgacctaattgaagatgcccgtcagtcgctgagtgagctggccgcgcaa
tctctggatactacggcactggaagcgctcgcgaattacataattcagcgcgataaataa
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