Raoultella sp. X13: DSD31_22940
Help
Entry
DSD31_22940 CDS
T05540
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
rao
Raoultella sp. X13
Pathway
rao00520
Amino sugar and nucleotide sugar metabolism
rao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
DSD31_22940
Enzymes [BR:
rao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
DSD31_22940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
AXC32124
UniProt:
A0A808XNH0
LinkDB
All DBs
Position
complement(4812259..4813878)
Genome browser
AA seq
539 aa
AA seq
DB search
MYTITNPILTGFNPDPSMCRQGEDYYIATSTFEWFPGVRIYHSRDLKNWSLVSTPLDRVS
MLDMKGNPDSGGIWAPCLSYADGLFWLLYTDVKIVDSPWKNGRNYLVTAPSIEGPWSEPI
AMGNGGFDPSLFHDSDGRKYYIYRPWGPRHHSDPHCTIVLQEYFPQTQTLSKTRKTLFTG
TALRYTEGAHLYHKEGWYYLLVAEGGTSYEHAVVVLRAKNIDGPYELHPDGTLMTSWHLP
ENPLQKSGHGSLLETHTGEWYMAYLTSRPQRLPGVPLLASGGRGYCSLGRETGIARIAWH
DGWPSVEGGKHAQLNVPGPQMAESRVVADERWREEFNRPTLNPELQTLRIPFDDTLGSLN
ARPGFLRLYGNDSLNSTFTQSTVARRWQHFAFRAETRMEFAPQNFQQSAGLTCYYNSKNW
SYCFVDYEEGQGRTIKVLQLDHNVPSWPLHEHPIAVPDAEQSIWLRVDVDHLVYRYSYSF
DGEQWHTVPVEYAAWKLSDDYIGGRGFFTGAFVGLHCEDISGDGCYADFDYFSYEPVVG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtacacgataactaacccgattctgaccggttttaacccggatccgtcaatgtgtcgc
cagggcgaggattactacatcgccacctccaccttcgagtggtttccgggagtgcggatt
taccactcgcgggatttgaaaaactggtcgctggtgagcacgccgctggatcgcgtgtcg
atgctggatatgaaaggcaaccccgactccggcgggatctgggcgccgtgtctgagctac
gccgacgggctgttctggctgctgtataccgatgtgaaaatcgtcgactcgccgtggaaa
aacggtcgcaactatctggtcaccgccccctctattgaggggccgtggagtgaaccgatc
gcgatgggtaacggcggctttgacccgtcgctgtttcacgattcggacgggcgtaaatat
tatatttaccgcccgtgggggccgcgtcaccacagtgacccgcactgtacgatcgtcctg
caggagtatttcccgcagacgcagaccctgtcgaagacgcgaaaaaccctgtttaccggc
acggcgctgcgctataccgaaggggcccatctgtaccataaagagggctggtactatctg
ctggtggccgaaggcggcaccagttatgaacatgcggtggtggtgctcagagcgaaaaat
atcgacgggccgtacgaactgcatccggacgggacgctgatgaccagctggcatctgccg
gaaaatccgctgcagaaaagcggccacggttcgctgctggagacccacaccggcgaatgg
tatatggcctatctcaccagccgtccgcagcgcttgcccggtgtgccgctgctggcctcc
ggcgggcgcggctactgctcgctggggcgggaaaccggcatcgcgcgcatcgcctggcac
gacggctggccgtcggtggaagggggaaaacacgcgcagctaaacgtgccggggccgcaa
atggctgaaagtcgtgtcgtggctgatgagcgctggcgagaagagttcaaccgcccgacg
ctcaacccggaactgcaaacgctgcgtattcccttcgatgacaccttagggtcgctgaat
gcccgtcccggctttctgcgcctgtacggcaacgattcgctcaactcgacgttcacccag
tccaccgtcgcccggcgctggcagcactttgccttccgcgccgaaacgcgaatggagttt
gccccgcagaattttcaacagagcgccggattaacctgttattacaacagcaaaaactgg
agctactgcttcgttgactatgaagagggacagggcagaaccattaaggtgttgcagctc
gatcataacgtgccgtcgtggccgctgcatgaacacccgatcgcggtaccggatgccgag
cagagcatatggctccgggtcgacgtcgaccatctcgtctatcgctacagctactcgttt
gacggcgagcagtggcacaccgtgccggtggaatatgccgcctggaagctgtcggacgat
tacatcggcgggcgcgggttctttaccggcgcctttgtcggcctgcactgcgaggatatc
agcggcgacggctgctatgcggactttgactacttcagctatgagccggtagtcggataa
DBGET
integrated database retrieval system
