Rhodovastum atsumiense: RHOA_2335
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Entry
RHOA_2335 CDS
T08162
Symbol
ispA
Name
(GenBank) geranyl diphosphate/farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rap
Rhodovastum atsumiense
Pathway
rap00900
Terpenoid backbone biosynthesis
rap01100
Metabolic pathways
rap01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RHOA_2335 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rap01006
]
RHOA_2335 (ispA)
Enzymes [BR:
rap01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RHOA_2335 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RHOA_2335 (ispA)
Prenyltransferases [BR:
rap01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RHOA_2335 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CAH2600947
LinkDB
All DBs
Position
RHOA:complement(2398255..2399169)
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AA seq
304 aa
AA seq
DB search
MTSGMNDNAVQDLPAALSRVAAEVEAALEDLLPLTEGAERRVIEAMRYGCLGGGKRMRAF
LVMEGARLFNVDRRCAARVGAALEMVHAYSLVHDDLPAMDDDDLRRGKPSCHKAFDEATA
ILAGDALQTRAFEVLAEADTHSNPEARCELVAALALAAGARGMVGGQMIDMVAEGQVLTA
EEITRLQALKTGRLIQFGAEAGAILGRAGPAQRHALAAYGRDLGAAFQIADDVLDQEGTA
AELGKTAGKDLAAGKATMVSVLGVARARAQAEMLAAQAARHLESFGAKAGLLRELAAYVV
TRRN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgggtatgaatgacaacgctgtccaggatctgcccgccgcgctgagccgggtt
gcggcggaggttgaagcggcgctggaagacctgctgccgctgacggaaggggccgagcgt
cgcgtgatcgaggcgatgcggtatggctgcctggggggtggcaagcggatgcgggccttc
ctggtgatggaaggggcgcggctgttcaacgtggaccgtcggtgtgcggcgcgggtgggt
gcggcgctggagatggtgcacgcctattcgctggtgcatgacgacctgccggcgatggac
gacgacgacctgcggcggggcaagccgtcctgccacaaggcgtttgacgaggcgacggcg
atcctggcgggggacgcgctgcagacgcgggccttcgaggtgctggcggaggcggacacg
cattccaacccggaggcgcggtgcgagctggtagcggcgctggcgctggcggcgggggcg
cgcggaatggtgggcggccagatgatcgacatggtggcggaggggcaggtgctcacggcc
gaggagatcacgcggctgcaggcgctgaagaccggtcggctgatccagttcggtgcggag
gcgggggcgatcctgggacgtgcggggccggcgcagcgtcatgcgctggcggcgtatggg
cgcgacctgggggcggcgttccagattgccgacgacgtgctggaccaggaggggacggcg
gcggagctgggcaagacggcgggcaaggacctggcggcgggcaaggcgacgatggtgtcg
gtgctgggggtggcgcgggcgcgggcgcaggcggagatgctggcggcgcaggcggcgcgg
cacctggagagtttcggcgcgaaggcggggctgctgcgcgagctggcggcgtatgtggtc
acccggcgcaactga
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