Riemerella anatipestifer RA-GD: RIA_1466
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Entry
RIA_1466 CDS
T02007
Name
(GenBank) Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00020
Citrate cycle (TCA cycle)
rar00190
Oxidative phosphorylation
rar00650
Butanoate metabolism
rar00720
Other carbon fixation pathways
rar01100
Metabolic pathways
rar01110
Biosynthesis of secondary metabolites
rar01120
Microbial metabolism in diverse environments
rar01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RIA_1466
00650 Butanoate metabolism
RIA_1466
09102 Energy metabolism
00190 Oxidative phosphorylation
RIA_1466
00720 Other carbon fixation pathways
RIA_1466
Enzymes [BR:
rar01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RIA_1466
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
GIDA
Pyr_redox_2
NAD_binding_8
RnlA_toxin_N
FAD_binding_3
Thi4
Lycopene_cycl
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ADZ12555
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Position
1461382..1463394
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AA seq
670 aa
AA seq
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MSILDSKIPAGPLADKWKNHKNHMNLVAPNNRDKIDVIVVGTGLAGGSAAATLAEQGYNV
KAFCYQDSPRRAHSIAAQGGINAAKNYQGDGDSIYRLFYDTIKGGDYRAREANVYRLAEV
SANIIDQCVSQGVPFGRDYGGQLDNRSFGGVQVKRTFYAKGQTGQQLLLGAYSAMSRQIG
KGRIKMYNRHEMMELVIVDGKARGIIARNLVTGEIERHSAHAVVIASGGYGNVYFLSTNA
MGSNCSAAWKIHKKGAYFANPCFVQIHPTCIPVHGTQQSKLTLMSESLRNSGRIWVPKKM
EDAVAIREGKLRPENIKEEDRDYYLERRYPAFGNLVPRDVASRAAKERCDAGFGIENNET
KEGVYLDFSTEIMKKGKEAALERNLHNPTEQQIYDLGKAWVEEKYGNLFQMYEKITADNP
YKTPMKIYPAVHYSMGGVWVDYNLMSTIPGCFVIGEANFSDHGANRLGASALMQGLADGY
FVLPYTIADYLSADIRTGQIPTDTPAFEQAEKEIQEKVNFFINNNGTHSVDYFHKKLGNV
MWNKVGMARNEQGLKEAIQEIEEIRKDFWQNVRVPGEANGMNPELEKAFRVADFLELGQL
MAMDALNRNESCGGHFREEYSTPDGEAQRDDENYKYAAVWEYKGEDINQEVLHKEELVYE
NIEVKTRSYK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtatattagattctaaaattccagcaggtccattagcggacaagtggaaaaatcat
aaaaatcacatgaacctagtagcccctaacaaccgtgataagatagatgttatcgtggta
ggaacagggttggcaggtggttctgctgctgctactttagcagagcaggggtataatgtg
aaagcattttgttatcaagattctcctagaagagctcactctattgcggctcaaggaggt
attaacgctgctaaaaactatcagggagatggagattctatctaccgattattctacgat
actattaaagggggagactaccgtgctagagaggctaatgtttatcgtctagcggaagtt
tcagctaatattatagaccaatgtgtttctcaaggggttccttttggaagagattacgga
ggtcagttagataaccgttctttcggtggggttcaagtaaagagaactttctatgctaaa
ggacaaacaggtcagcagcttctattaggagcttattctgcgatgagtcgtcagataggt
aagggtagaattaaaatgtacaaccgtcatgaaatgatggagttggtaattgttgacgga
aaagcaagagggattatcgcaagaaacttagtaactggagaaatagaaagacactctgca
cacgcagtagtcattgcttctggaggttatggtaatgtttatttcctttctacaaatgct
atggggtctaactgttctgccgcttggaaaatccataagaaaggagcttactttgcaaac
ccttgtttcgttcagatacaccctacttgtattcctgttcacgggacacagcaatctaaa
ttgacgttgatgtctgagtctttaagaaactctggtagaatatgggttcctaaaaagatg
gaagatgctgtagccatcagagaaggtaaactaagacctgaaaatatcaaagaagaagat
agagactattatttagagagaagatatccagcatttggtaacctagtgcctcgtgatgtg
gcttctagagcggctaaagagcgttgtgatgctggttttggtatcgaaaataacgaaact
aaagaaggtgtttacctagacttctctaccgaaatcatgaagaaaggtaaggaagcggct
ttagaaagaaatctccataatcctacagagcaacaaatctacgatttaggtaaagcttgg
gtagaagaaaagtacggaaacttattccaaatgtatgaaaaaattacagcggataacccg
tacaaaacaccaatgaagatttatccagcggtgcactattctatgggtggcgtttgggta
gattataacttaatgtctacaataccaggttgtttcgtgattggagaggctaacttctca
gaccacggtgctaatagacttggagcttctgctctaatgcaaggtttagcggatgggtac
ttcgtattgccttatacaattgcagattatctttctgcggatattagaacggggcaaatt
cctacagatacaccagcttttgaacaagcagagaaagagatacaagagaaagttaatttc
ttcatcaataataacggaactcactctgtagattatttccacaaaaaattaggaaatgta
atgtggaacaaggtgggtatggctagaaacgagcaaggtttgaaggaagctatccaagaa
attgaagaaattagaaaagatttctggcaaaatgtaagagttccaggtgaagctaacggt
atgaatcctgaactagaaaaggcattccgtgtagcagatttcttagagctaggtcagctt
atggcgatggatgcacttaacagaaatgaatcttgcggaggacacttccgtgaagaatac
tctactccagacggagaagcacagagagatgatgagaactataagtatgccgcagtttgg
gaatacaaaggagaagacatcaatcaggaagtcttacacaaagaagaactggtttacgag
aatatagaagtgaaaacaagaagttataaataa
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