Riemerella anatipestifer RA-GD: RIA_1486
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Entry
RIA_1486 CDS
T02007
Name
(GenBank) Glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar00260
Glycine, serine and threonine metabolism
rar00460
Cyanoamino acid metabolism
rar00630
Glyoxylate and dicarboxylate metabolism
rar00670
One carbon pool by folate
rar00680
Methane metabolism
rar01100
Metabolic pathways
rar01110
Biosynthesis of secondary metabolites
rar01120
Microbial metabolism in diverse environments
rar01200
Carbon metabolism
rar01230
Biosynthesis of amino acids
rar01240
Biosynthesis of cofactors
rar04981
Folate transport and metabolism
Module
rar_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RIA_1486
09102 Energy metabolism
00680 Methane metabolism
RIA_1486
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RIA_1486
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RIA_1486
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RIA_1486
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RIA_1486
Enzymes [BR:
rar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RIA_1486
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ADZ12575
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Position
1488657..1489925
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AA seq
422 aa
AA seq
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MRDVIFDLIEQERARQTHGIELIASENFVSDEVMKAMGSVLTNKYAEGYPGRRYYGGCEV
VDEVEKLAIDRAKQLFGVEYANVQPHSGSQANAAIYLACLKPGDTILGLDLSMGGHLTHG
SFVNFSGIQYNAQFYGVERETGLIDYEAMRQKALEVKPKLIIAGYSAYSRDLDYAKFREV
ADEVGATLWADIAHPAGLVAKGLLSSPFPYCDVVTTTTHKTLRGPRGGLIMLGKDFENPY
GHKTPKGETKMMSAVLDSAVFPGIQGGPLEHVIAAKAVAFGEAIDGKFETYAKQVVANAR
ALANALIDRGFEIVGGGTDNHLMLVDLRNKGVNGKETEKALVKADITCNKNMVPFDDKSA
FITSGIRLGTPAITTRGLKENDMDSVAELISKVVSNLNNDSVLEEVKKQVNDLMSSRPLF
QY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagagatgtaatttttgatttgatagagcaagaaagagcacgccaaacacatggtata
gagctaattgcttctgaaaactttgtttctgatgaagtgatgaaagctatgggaagtgtt
cttactaataaatatgctgaaggctatccaggaagacgctactatggtggttgtgaggtt
gttgatgaagtagagaaattagcgatagatagagcaaaacaactatttggagtagaatat
gctaacgttcagccacattctggttcgcaagctaatgcagctatctatttagcgtgtctt
aaacctggagatacaatattgggattagatttatcaatgggagggcatttaacgcacggt
tcgtttgtcaacttttcaggaatacaatacaatgcacagttctatggtgtagaaagagaa
acagggctgatagattacgaagctatgcgtcagaaagccttagaagtaaagccaaaactt
attatagcaggatattcggcgtattctcgtgatttagattatgctaaatttcgtgaggta
gcagatgaggtaggagctacactttgggcagatattgcacaccctgcaggattggttgct
aaaggtttattaagttctccgtttccttactgcgatgtggtaactactactacacacaaa
actttaagaggacctagaggaggtttgataatgttaggtaaagattttgaaaatccttat
ggtcataaaacacctaaaggagaaaccaaaatgatgagtgcagtactagatagtgcggta
tttccagggatacaaggcggtccgctagagcatgtaatagcggctaaagcagtagctttt
ggagaggcgatagatggtaaatttgaaacctacgctaaacaagtagtggctaatgcaagg
gctttggctaatgctttaatagatagagggtttgaaatcgtaggtggaggaacagataat
catcttatgttggtagaccttcgtaataaaggtgttaacggtaaggagacagaaaaagcc
ttagtaaaagcagatattacttgtaataagaatatggtgccgtttgatgataaatcagcg
ttcattacttcgggcatcagattgggaactcctgcaattaccactagaggacttaaagaa
aacgatatggattccgtagctgaactaatttctaaagtggtttctaatcttaataatgat
tctgttttagaagaggttaaaaagcaagtgaatgatctgatgtctagtagaccgttattt
cagtactaa
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