Rhodamnia argentea (silver malletwood): 115726548
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Entry
115726548 CDS
T10595
Name
(RefSeq) putative pectate lyase 21 isoform X2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg00040
Pentose and glucuronate interconversions
rarg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115726548
Enzymes [BR:
rarg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115726548
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115726548
NCBI-ProteinID:
XP_030512324
UniProt:
A0A8B8MRQ7
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Position
8:20281169..20288141
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AA seq
331 aa
AA seq
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MTTLPYSDVDFSLRAMAGRAEGFGRLAVGGLHGPLYHVTSLSDDGPGSLREGCRRKEPLW
IVFEVSGTICLSSYLSVSSHKTIDGRGQRIKLTGKGLRLKDCENIIICNLEFDGGRGHDV
DGIQIKPNSRNIWIDRCSLRDYDDGLIDITRQSTDITVSRCHFSHHDKTMLIGADPSHTM
DRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIFSQCNIYEA
GQKKKTFEYYTEKAADKEQAVSGLISSEGDSFSNGAQASLQAGFGECGVFHPSEFYPNWT
VESPSDSLKYVLQICSGWQSIPRPVDHMVVG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccttgccctactccgacgtcgacttcagcttgagagcaatggccggtcgggcc
gagggattcggccggttggccgtcggcggcctccatggacctctctatcacgtcacttct
ctctcagatgatggtcctggatcgctacgagaaggatgccggagaaaagagccattgtgg
atagtttttgaggtttcgggtaccatatgcctttcatcttatttgagcgtgtcatctcac
aagacaattgatggccgaggtcaaaggataaagctcactggcaagggcttgagactgaag
gattgcgagaatattataatatgcaacctggagtttgacggtggtagaggtcatgatgtt
gacggtatccaaattaaaccaaattcaaggaacatttggatagaccgctgcagccttcgt
gattatgatgatggattgatagatatcacccgccagagcaccgacattactgtttctaga
tgtcacttttcacatcatgataagactatgcttattggagctgacccctctcatactatg
gatagatgcatccgtgtaaccatccaccattgcttctttgatggcacacggcaaaggcat
cctcgggtacggtttggaaaagttcatctgtacaacaattataccagaaactggggcata
tatgctgtttgtgcgagtgtagaatcccagattttctcgcaatgcaatatatatgaagca
ggacaaaagaaaaaaacgtttgagtattacactgagaaggcagcagataaggagcaggca
gtatctggcttaataagttctgaaggagactcattctcgaatggtgcccaagcatcgctg
caagctgggtttggagaatgtggcgttttccatccaagtgaattttacccgaactggaca
gtagaatcgccttcggattctctgaaatatgttctccagatatgctcaggttggcaatcc
attccaaggccagtcgatcatatggtagttggctag
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