Rhodamnia argentea (silver malletwood): 115735115
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Entry
115735115 CDS
T10595
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg00040
Pentose and glucuronate interconversions
rarg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115735115
Enzymes [BR:
rarg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115735115
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115735115
NCBI-ProteinID:
XP_030522072
UniProt:
A0A8B8NJ18
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Position
10:24866379..24871448
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AA seq
383 aa
AA seq
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MGNAHGHRHKHHHDTSPSNVPFPNKFVPQPPHISASHNHAPSDPSPTRNGGGMGTLPYSH
VDSTLRSLAGQAEGFGHSAVGGLHGPLYRVTTLADDGPGSLRDGCRRKEPLWIVFEVSGT
IHLSSYLNVSSYKTIDGRGQRIKITRKGLRLKESEHVIICNLEFEGGRGPDVDGIQVKPN
SKHIWIDRCSLRDYDDGLIDITRQSTDITISRCHFSAHDKTMLIGADPSHVEDRCIRVTI
HHCFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQIFSQCNIYEAGQKKPAFK
YLTEKAADKEDPGSGHIRSEGDLFIVGTQAGLMTDKAEQCMFHPSEYYPSWTVEPPTDSL
KQVLQHCTGWQSVPLPVDHGVTA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgcccatggccatcgccacaagcaccaccacgacacaagtccatcaaacgtc
ccttttcccaataaattcgtccctcagccaccccatatctccgctagtcataaccacgct
ccttcggatccatcccctacccgaaacggcggcggcatggggactttgccgtactcccac
gtcgactccacccttcggagcctcgccggccaagcagaggggttcggccactccgccgtg
ggcggtctccacggccctctctaccgcgtcactactttggctgacgatggtccaggatcg
cttcgtgatgggtgccgcagaaaagaacccctttggatagttttcgaagtgtcaggcacc
attcatctctcgtcttacttaaatgtgtcttcctataagaccattgatggccgtggccaa
cggataaaaatcaccaggaaaggtttgaggttgaaggaatctgaacacgttatcatttgc
aatctggagttcgaaggcggtagaggaccggatgtcgatggcattcaagtaaagcccaat
tcgaaacacatatggattgaccgttgcagcctccgtgattatgacgatggccttatagat
ataacaaggcagagcacagatatcaccatttctaggtgtcacttttctgctcatgacaag
acaatgctcattggagcagatccctcccacgttgaggacagatgtattagggtgaccatt
caccattgctttttcgatggaactcgacaacggcacccccgagtgaggtttgcgaaagta
catttgtacaacaattacaccagaaattggggcatatatgctgtttgtgctagtgtagaa
tcacagatattttcccaatgcaatatctatgaagctggacagaagaagccggcattcaaa
tatctcacagaaaaggctgctgacaaggaagatccaggcagtggtcacataagatctgaa
ggggacttgttcatagtgggaactcaagcaggtctaatgactgataaagctgagcagtgc
atgtttcatcccagcgaatactatccctcgtggacggtggaacctcccacagattccctc
aagcaggttctacaacattgcacaggatggcaaagtgtgcctctgccggttgatcatgga
gtcactgcgtaa
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