Rhodamnia argentea (silver malletwood): 115741347
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Entry
115741347 CDS
T10595
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg00040
Pentose and glucuronate interconversions
rarg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115741347
Enzymes [BR:
rarg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115741347
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GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115741347
NCBI-ProteinID:
XP_030531087
UniProt:
A0A8B8P8R2
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All DBs
Position
8:6405933..6407991
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AA seq
439 aa
AA seq
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MEGIKLVGFILALSLAALVPCLEAHIGEFDEYWKKRADEAQKHALDAYHPNPENVTAHFN
SRVHRVLDRTNITRRQLSMHKYVGPCLATNPIDRCWRCRKDWAKNRKRLAKCVLGFGRRT
TGGLYGKIYVVYDGSDDNVVNPKRGTLRHAVIQKQPLWIIFARSMIIRLSQELLVTSHKT
IDGRGANVHIAYGAGIMIQFSRNVIIHGLHIHDIITKPGGLIRDSYNHLGFRTRSDGDGI
SIFGSTNIWIDHVSMARCQDGLIDAIQGSTAITISNGHYTHHNDVMLFGASDTYPQDKIM
QVTVAFNHFGRGLIQRMPRCRWGFFHVVNNDYTHWLMYAIGGSSQPTIISQGNRFIAPPN
LAAKEVTKRDYASPDVWRKWTWRSQGDLLMNGAFFVQSGQPLKKKPFGRLDMIKAKPGTF
VTRLTRMSGTLGCKPNRPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggagggaattaagctcgtcggattcatcttggccctatccttggctgctctcgtacca
tgcctcgaggctcatatcggggagttcgacgagtactggaaaaagcgcgcggacgaggcc
cagaagcatgctcttgacgcatatcaccccaaccctgaaaacgtcacggcgcatttcaat
tcgcgggttcacagggtcttagacagaaccaacattacaaggaggcaattgagcatgcac
aaatacgtcggcccgtgccttgccacgaatccgatcgaccgctgctggcggtgcaggaag
gactgggcaaagaaccggaagaggctggccaagtgcgtgctcggatttggccgcaggacc
acaggaggcctgtacggtaaaatctatgttgtctacgatggctcggacgacaacgtggtc
aacccaaagcgcgggacgctccgccacgccgtgatccagaagcagccgctgtggatcatc
ttcgcacgcagcatgatcatcaggctgagccaggagctgctggtgacgagccacaagaca
atagatggccggggcgcaaatgtgcacatcgcctatggcgccggcatcatgatccagttc
tccaggaacgttatcatccacgggctccacatccacgacatcatcacaaagcccgggggc
ttgatcagggactcgtacaaccacttggggttcagaacgaggagcgacggggacggcatc
tccatctttggctcgaccaacatctggatcgaccatgtgtccatggcaagatgccaggat
gggctcatcgacgccatccagggatcgacagccatcactatctcgaacggccactacacc
caccataacgacgtgatgctcttcggcgcgagcgacacgtacccgcaagacaagataatg
caagtgacggtcgcgttcaaccactttggtcgggggctgattcagcggatgccgaggtgc
cgatggggcttcttccacgtcgtcaacaacgactacacccactggctcatgtatgccatc
gggggcagctcgcagcccaccatcatctcccagggcaaccgcttcatcgccccgcccaac
ttggccgctaaggaggtgaccaagagggattacgcatcgccggacgtttggcgcaaatgg
acgtggagatcgcagggcgacctgttgatgaacggggccttcttcgtgcagtcggggcag
ccgctgaagaagaagccgttcgggaggctcgacatgatcaaggcgaagcccgggacgttc
gtgactcggctcacccgcatgtccggcactctcggttgcaagcctaaccgcccgtgctaa
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