KEGG   Rhodamnia argentea (silver malletwood): 115742316
Entry
115742316         CDS       T10595                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115742316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rarg03041]
    115742316
Spliceosome [BR:rarg03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115742316
 Complex B
    115742316
 Complex C
   U2 SnRNP specific factors
    115742316
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 115742316
NCBI-ProteinID: XP_030532398
UniProt: A0A8B8PEB9
LinkDB
Position
10:complement(20435590..20441898)
AA seq 509 aa
MSSTLLEVTRAAHEEVERLERLIVKDLQNEPPSNKDRLFQSHRVGHMIDTIVATTEKLIE
VYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRKHPAARVVDANEEYEELL
KEEPQIEFSGEEAFGRYLDMHELYHQYINCKFGEPIEYSAYLDVFSQPERISRKLKLTRQ
YKEYLENLLEYLVYFFQRTEPLQDLDRIFAKVEGDFEEEWAENKVEGWENGGQENGHGAL
QNTVIDLDYYSSIEELMEVGPEKLKEALTALGLKSGGTIQQRAERLFLTKHTLLDKLDKK
HFAKGSRGSEQNGVGMAIQQTDNGKDIALMGVKLKKLCSLLEEVITRTKENVEKKQALTY
EEMEAEREEEETQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIQEAQELWERIQERSGVNKWR
PDLEEEYEDKEGNIYNKKTYADLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgttgctggaggtgacgcgcgcggcccacgaggaggtggagcggctcgag
cgtctcatcgtcaaagatctccagaacgagccgccgagcaacaaggaccggctcttccag
agccaccgcgttggccacatgatcgacactatcgtcgccaccacagagaaactcattgag
gtatacgaagataaggacaatgctaggaaagatgagattgcggctttgggaggccagact
gccacaggaacgaacgtctttagtgctttttatgataggctgaaagagatacgtgagtac
catagaaagcacccagctgctcgtgttgtcgatgccaatgaggagtatgaggagcttctg
aaggaggaacctcaaattgagttcagtggggaggaagcttttggccgatatttggacatg
catgaattgtaccatcagtacatcaactgcaaattcggagagcccattgagtactctgct
tatcttgatgttttctctcaaccagagaggatttctaggaaattgaaattaacaaggcag
tataaagaatatctggaaaaccttctggaataccttgtatatttctttcagcgaacagag
cctctgcaagatctggataggatatttgcaaaggttgagggcgattttgaagaagaatgg
gcagagaacaaagttgaagggtgggagaatgggggtcaagaaaatggacatggtgcactg
cagaatacggtgattgacctggactattatagctctatagaggaactgatggaagttggt
cctgagaagttgaaggaggcattgacagctttaggattaaaatcaggcggcacaattcag
cagcgtgccgagagactcttccttacaaagcatacacttcttgataagctggacaaaaag
cattttgcaaaaggttctcgtgggtcagagcagaatggtgtaggtatggctatccaacag
acggacaatgggaaagatattgctttgatgggggttaaactgaaaaaactctgctcgctg
cttgaggaggtaattactcgaacaaaagaaaatgttgagaaaaagcaggctctgacatac
gaggaaatggaagcagaacgtgaggaggaagagacacaagctgacactgaaagtgatgat
gatgagcaacagatatacaaccccctcaaattgccaatgggttgggatgggaaacctata
ccttattggctctataagcttcatggtcttggtcaggaattcaaatgcgagatatgtggc
aaccacagttactgggggcggagggcttttgagcggcattttaaggaatggcgccatcag
catggcatgcgctgtcttggtattccaaatacaaagaacttcaatgagattacatccatc
caggaagcacaagaactctgggagagaatacaggagaggtcaggagtgaacaagtggcgc
ccggatctggaggaagaatacgaagacaaggaaggcaacatctataacaagaagacttat
gccgatcttcagcgccagggtctcatttaa

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