Radiobacillus kanasensis: KO561_00400
Help
Entry
KO561_00400 CDS
T08696
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rax
Radiobacillus kanasensis
Pathway
rax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KO561_00400 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rax03021
]
KO561_00400 (rpoB)
03400 DNA repair and recombination proteins [BR:
rax03400
]
KO561_00400 (rpoB)
Enzymes [BR:
rax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KO561_00400 (rpoB)
Transcription machinery [BR:
rax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KO561_00400 (rpoB)
DNA repair and recombination proteins [BR:
rax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KO561_00400 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UFT99486
LinkDB
All DBs
Position
74735..78277
Genome browser
AA seq
1180 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTASYEWFLEEGLREMFQDISPIEDFTG
NLSLEFVDYSLGEPKYPVDESKERDVTYNAPLRVKVRLLNNETGEVKEQEVFMGDFPLMT
DTGTFIINGAERVIVSQLVRSPSVYFSKKIDKNGKRGYTATVIPNRGAWLEFETDAKDVV
HVRIDRTRKLPITVLLRALGFGTDQEIIDLIGENEYLRNTLEKDNTENSEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLAHVGRYKINKKLHIKNRLFNQTLAETLADPETG
EVLAQKGDKIDRRLLNKLIPYLEGEENNFGEEILEPHEGVLEDQIKIQSIKIVDPTDPEG
EKTLNVIGNANVEKSVKNIAPADILSAISYFFNILHQVGDTDDIDHLGNRRLRSVGELLQ
NQFRIGLSRMERVVRERMSIQDTSSITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPL
AELTHKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKV
NTFGFIETPYRRVDPETGKVTEQIDYLTADEEDNYVVAQANARLSDDLSFVDEEVIARFR
GENTVVPRDRLDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMKPEAPI
VGTGMEYVSGKDSGAAVICRHEGIVERVEAKEIHVRRVSEVDGKQVKGDVDRYRLQKFIR
SNQGTCYNQRPIISLGDHVVKGEILADGPSMEDGELALGRNVLVGFMTWEGYNYEDAIIM
SERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALRDLDERGIIRVGAEVS
DGDLLVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKIFNRED
GDELPPGVNQLVRVYIVQKRKIHEGDKMAGRHGNKGVISKILPEEDMPFLPDGTPIDIML
NPLGVPSRMNIGQVFELHLGMAARALGIHVASPVFDGAREEDVWETLEEAGMPRDAKTIL
YDGRTGDPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGE
MEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGIPESFKVLIKELQS
LGMDVKMLSADEQEIELRDIEEDENQSADKLNLEVEEGQM
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccaacgtagaagttatgcacgcatc
agtgaagtacttgagttaccgaatcttatcgagattcagaccgcttcttacgaatggttt
ttagaagaaggtttgagagaaatgttccaggatatttctccaatcgaggattttacaggt
aatttatctttggagttcgtagattatagtctaggagaaccgaagtatcctgtagatgaa
tcaaaagaaagagatgttacttataacgctcctcttcgtgtaaaagttcgccttcttaac
aatgaaacgggcgaagtaaaagaacaagaagtctttatgggggatttcccattaatgacg
gacactggaacctttattattaatggtgcagaacgtgtcatcgtttctcagttagtccgc
tctccaagcgtgtacttcagtaaaaaaattgacaaaaatgggaaacgcggttatacagca
actgttatccctaaccgaggtgcttggttagagtttgaaacagatgctaaagatgttgtg
cacgttcgtattgatcgtacacgtaaattgccaatcactgttctattaagagcacttggt
tttggtacagatcaagagattattgatttgattggtgaaaatgaatacttaagaaacacg
ttagaaaaagataacacggagaatagcgagaaagccttactagagatttatgagcgtcta
cgtcctggtgaaccaccaactgttgagaacgccaaaagcttactcgtatcaagattcttt
gaccctaaacgttatgatttagcgcatgtaggtcgctataaaataaataaaaagcttcat
ataaagaatcgtttatttaatcaaacgcttgcagaaacccttgcggatccggaaacgggt
gaggtgttagcgcaaaaaggtgataaaattgatcgccgtttgttaaataaactaatccct
tacttggaaggggaagaaaacaattttggtgaagagattctggagcctcacgaaggtgta
ttagaggatcaaattaagattcaatccatcaaaattgtcgatcctactgatccagaagga
gaaaaaacgttaaacgttatcggtaacgccaatgtggaaaaaagtgtgaagaatattgcg
ccagcagacattctatctgcgattagctatttctttaacattttacaccaagttggtgat
acagatgatatcgaccacttaggtaaccgtcgtctgcgttctgtaggggaattgttacaa
aatcaattccgtattggtttgtccagaatggagcgcgtggtacgtgaaagaatgtctatt
caggatacttcttccattacaccacaacaattaatcaatattagaccagttattgcatcg
attaaagagtttttcggaagctctcaattatctcaatttatggaccaaacaaatccgtta
gcggagttaacgcacaaacgtcgtctatctgcattgggacctggtggtttaacgcgtgaa
cgtgctgggtttgaagttcgtgacgttcactattctcactacggccgtatgtgtccaatt
gagacgccagagggaccaaacattgggttaattaactcattatcctcttatgcaaaagta
aatacatttgggtttatcgaaacaccttatcgtcgtgtcgatccagaaactggtaaagta
accgaacaaattgattacttaacagccgatgaagaggataactatgtcgtagcacaagcg
aatgctagattatcagatgatctatctttcgtggatgaagaagttatcgctcgtttccgt
ggggaaaacaccgttgttcctcgtgatcgccttgattatatggacgtttctcctaagcaa
gtagtatctgcggcgacagcttgtattccgttcttggaaaacgatgactccaatcgtgcc
ttgatgggtgcgaacatgcaacgtcaagcggtaccgttgatgaaaccagaagctccaatt
gttggaacaggtatggaatacgtatctggaaaagactctggtgcagctgttatatgtaga
catgaaggtatcgtggaacgtgtggaagcgaaagaaattcatgtgagaagagtgtcagaa
gtagatggtaagcaagtcaaaggtgatgttgatcgctatcgtttacaaaagttcatccgt
tcgaaccaaggtacatgttacaaccaacgtccaattatcagcctaggcgaccatgtggta
aaaggggaaattttagccgatggcccttcgatggaagatggggagcttgcgttaggacgt
aacgttctagttggctttatgacttgggaaggctataactacgaggatgcgatcatcatg
agtgagcgtctcgttaaagatgatgtgtacacatctattcatattgaagaatatgaatca
gaagctagagatacgaagcttggaccggaagaaatcacacgtgatattccgaatgttggg
gaagaagcattacgtgacctagacgaacgtggaattatccgtgtcggtgcagaagtaagc
gatggagatttgctagtagggaaagtaacgccaaaaggggtaaccgaactatctgcagaa
gagcgtctccttcacgctattttcggagagaaagcaagagaagtaagagatacttcttta
cgcgttcctcacggggcgggtggtatcgtattagatgttaagatctttaaccgtgaagac
ggagatgagcttccgccaggtgtaaaccaactcgttcgtgtttatatcgtacaaaaacgt
aagattcacgaaggagataaaatggctggacgtcacggtaacaaaggggttatctccaag
attttaccagaagaagatatgcctttcttaccagatggaacacctattgatatcatgttg
aatccgctaggggtaccgtcccgtatgaatatcggacaggtatttgaattacacctaggt
atggctgctcgtgctcttggaattcatgttgcatctcctgtatttgatggtgctcgtgaa
gaagatgtttgggaaacacttgaagaagctggtatgccaagagatgcgaaaacaattctg
tatgacggcagaacaggagatccattcgacaaccgtgtatccgttggggtcatgtatatg
atcaaactagcacacatggttgacgataaacttcacgctcgttcaacaggtccatactct
cttgttacacaacaaccacttggtggtaaagcacaattcggtggtcaacgtttcggggag
atggaggtatgggcactagaagcttacggtgcagcgtacactttgcaagaaattcttacc
gtgaagtcggatgacgtcgtaggacgtgtgaaaacgtacgaggcgattgtaaaaggagat
aacgttccagagcctggaattcctgaatcgttcaaagtattaatcaaagaacttcaaagt
ttaggtatggacgttaaaatgctatctgcagatgaacaagaaattgaactccgtgatatc
gaagaagacgaaaatcaatcagcagataagttgaacttagaagtagaagaaggtcaaatg
taa
DBGET
integrated database retrieval system
