Rhodopirellula baltica: RB6483
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Entry
RB6483 CDS
T00134
Symbol
recQ
Name
(GenBank) DNA-dependent ATPase DNA helicase (RecQ)
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB6483 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rba03019
]
RB6483 (recQ)
03400 DNA repair and recombination proteins [BR:
rba03400
]
RB6483 (recQ)
Enzymes [BR:
rba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RB6483 (recQ)
Messenger RNA biogenesis [BR:
rba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RB6483 (recQ)
DNA repair and recombination proteins [BR:
rba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RB6483 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
RecQ_Zn_bind
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
CAD74829
UniProt:
Q7UQ76
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All DBs
Position
3427842..3429392
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AA seq
516 aa
AA seq
DB search
MTSTSLMFLESLIKKVSPPMGESANANLESGKRSLQQAQKILQDVFGHHAFRPSQAAVIQ
HVLAGEHAMVIMPTGRGKSMCFQIPALLGTDADLTLVLSPLIALMQDQVDGLVAKGIDAT
LINSSLDRSEREKRQKNLRENQYRLLYVTPERFRKPEFLDAISGRNIQLLAIDEAHCVSQ
WGHDFRPDYSRIADIRKQLGSPTTIALTATATAECRADIVDQIGLGKGEMRLFHEGIDRP
NLRIDVQSVMGESEKFEMILEALSAPPFLPTDDTPVGGAIIYFSLIKTLTHFSDLLLSQS
IDHVCYHGDQSRKDRRRIQNQFMSGERDLVLATPAFGMGVDKENIRLVIHAETPGSIESY
YQEIGRAGRDDKPSRCLWLYDQDDLMTQMQFIEWANPDADFYDRLMFALEHHADRCAAYG
LDWLRKELQRVSPHDHRVDTAIAMLDRHGVVAGPREPECFQLSGDLPEKFRDNEWLAEKR
QRDQKRLYAMVQFAATPAEERQAFLNRYFLDSTIVE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgacttcgctcatgtttctcgaatccctaataaagaaagtttcgccaccgatg
ggtgaatcagccaacgcgaatttggagtcgggcaagcgttcgctgcagcaagcccagaaa
atcctgcaagacgtattcggccatcacgcatttcgccccagccaggccgccgtcattcaa
catgttctcgctggcgagcacgccatggtgatcatgcccacggggcgtggcaagtcgatg
tgtttccaaattcctgcgctgctggggaccgacgcggatctgacactggtgctttcgccg
ttgatcgctttgatgcaggaccaagtcgatggattggtggcgaaaggcatcgacgcgact
ctcattaattcttcgttggatcgaagtgaacgcgagaaacggcagaagaatttacgtgag
aatcaatatcgcctgctgtatgtgacgcctgaacgatttcgcaaacctgagttcctagac
gctatttcgggacgaaacattcagctgctcgcgattgacgaagcacactgtgtcagccag
tggggccacgactttcgccccgattacagcaggatcgccgacatccggaaacaattgggc
tctccgacaacaatcgccctgaccgcaacagcgacggcggaatgccgagctgacatcgtg
gatcaaattggtcttggtaaaggcgaaatgcggctgttccatgaaggaatcgatcgcccc
aacttgcgaatcgacgtccaatcggtgatgggtgagagcgagaagttcgagatgatcctc
gaggcactctcggccccaccatttctcccaaccgacgatactcctgttggcggagcaatc
atctacttctcgctgatcaaaacgctgacacatttcagcgacctgttgctgtcgcaatcc
atcgatcatgtctgttaccacggtgaccaatcacgaaaagatcgccgtcggatacaaaac
caattcatgtccggcgaacgagacctcgtcttggccactcccgcattcggaatgggagtt
gacaaagaaaacattcggttggtgatccatgctgaaacacctggatcgatcgaatcctat
taccaagagattggtcgagcgggtcgggacgacaaaccgagtcgctgcctttggctttac
gatcaagacgacttgatgacacagatgcagttcatcgagtgggccaatcccgatgcagat
ttctacgaccgtttaatgttcgctttggaacatcatgcggatcgatgtgcagcctacggc
ttggactggcttcgcaaagaattgcaacgggtcagtcctcacgaccaccgagtcgacaca
gccattgcgatgctcgaccgacatggtgttgtcgcaggcccaagggaaccggaatgcttc
cagctgagcggtgacttaccggaaaagttccgcgacaacgaatggctggcggaaaaaaga
caacgggatcaaaaacgtctgtatgcgatggtgcagtttgcagctactcccgcagaagaa
cgacaagcattcctcaatcgatactttttagatagtacgatcgttgaatga
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