Rouxiella badensis subsp. acadiensis: H2866_12545
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Entry
H2866_12545 CDS
T06835
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Pathway
rbad00900
Terpenoid backbone biosynthesis
rbad01100
Metabolic pathways
rbad01110
Biosynthesis of secondary metabolites
Module
rbad_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
H2866_12545 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rbad01006
]
H2866_12545 (ispA)
Enzymes [BR:
rbad01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
H2866_12545 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
H2866_12545 (ispA)
Prenyltransferases [BR:
rbad01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
H2866_12545 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF6792
Motif
Other DBs
NCBI-ProteinID:
QOI53817
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All DBs
Position
complement(2736234..2737163)
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AA seq
309 aa
AA seq
DB search
MSQIEQQSEAKSFSHQLRELQKRVDGVLEGYVAELPFSDTPLVAAMHHGSLLGGKRLRPY
LVYASGQLFGLQLTSLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEANA
ILAGDALQTLAFSILADVEMPEVAVSDRLSMISELARASGVAGMCAGQALDLEAEGKQVD
LQALERIHRHKTGALIRAAVRIGALAAGARGRAALPLLDRYAEAIGLAFQVQDDILDVIG
DTHTLGKRQGADQQLGKSTYPALLGLEGAQTKAKDLYQEAVAALDELATHSYNTAPLLAL
ARFVIERDS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaatagaacaacaaagcgaagcgaaaagcttcagtcatcagctccgtgagctg
caaaagcgtgtcgatggcgttcttgaaggctatgtcgccgaactgccattttccgacacg
ccgctggttgccgcgatgcaccatggctcattgctgggtggaaaacgcctgcgtccttat
ttagtgtatgccagcggacaactttttggcctgcaattaaccagcctggacgcgcctgcc
gctgccatcgaatgcattcacgcttattcactcattcacgatgacctgcctgcgatggac
gacgacgacctgcgtcgcggccagccgacctgccacgtgaaattcggtgaagccaatgcc
attttggccggtgatgccctgcaaacgctggcgttttcgattctggccgacgtagagatg
cccgaggtcgcggtgagcgatcgcttgtcgatgatctccgaactggcgcgcgccagcggc
gtagcgggcatgtgtgcgggtcaggccttagacctcgaggccgaaggcaagcaggttgat
ttacaggcgctggagcgtatccatcgccataaaaccggcgcgctcattcgcgccgccgtt
cgcatcggcgctctggcagccggtgctcgcggtcgagctgcgctaccgctgcttgaccgt
tacgccgaggccatcggtctcgccttccaggttcaggacgatattctggatgtcattggt
gatacccacacgctgggcaagcgtcagggtgcagatcaacagcttggtaaaagtacttat
cccgccctgcttgggctggaaggcgcacagaccaaagccaaagacctttatcaggaagcc
gttgccgccctggacgagctggccacacattcttacaacacggccccattgctggcatta
gcccgctttgttattgagcgtgacagctga
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