Rhizobium bangladeshense: J2J98_01995
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Entry
J2J98_01995 CDS
T07228
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
rban
Rhizobium bangladeshense
Pathway
rban02020
Two-component system
rban02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J2J98_01995 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J2J98_01995 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rban03021
]
J2J98_01995 (rpoN)
Transcription machinery [BR:
rban03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J2J98_01995 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
PP_kinase_C
GCS2
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QSY88960
LinkDB
All DBs
Position
407401..408960
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AA seq
519 aa
AA seq
DB search
MALSANLFLRQSQSLVMTPQLMQSIQLLQMTHFELTQFIAQEVEKNPLLEFPSNDGEASD
ERAAIEDEQFGHSPEDAGSDDGADNRAEALSSDWYDTGGSESTSRLNDELDANYTNVFPD
DGGPQRLDAPELVGQWKSMPGSADGVDYDLDDFVAGQVSLRDHLAQQIPFVLPDMSDRLI
AQNFVDQLDDAGYIQVDLGETGERLGTSLTQVEHVLAALQTLDPPGVFARSLAECLAIQL
RQKDRYDPAMQALVENLELLARRDFATLKRLCGVDEEDLLDMLGEIRQLNPKPGSGFETG
VSEAIMPDVVVRPSSDGGWLVELNPDTLPRVLVNQSYFSRVTRNGEDHAFLSECLQSANW
LTRSLDQRAKTIMKVASEIVRQQDAFLLHGVDHLRPLNLKTVAEAIKMHESTVSRVTSNK
YMLTPRGLFELKYFFTVSIGAVEGGDSHSAEAVRHKIRTLIMQESPDAVLSDDDIVDMLK
KGGIDLARRTVAKYREAMNIASSVQRRREKRALAKVAGF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtccgccaatctattcctgcgccagagccagtccctggtcatgacaccgcaa
ctgatgcagtccatccagttgctgcagatgacgcatttcgagctcacccagttcatcgcg
caggaagtggagaagaacccgctgctcgaatttccgtcgaatgacggagaggcgagcgac
gaacgggcggctatcgaggacgagcagttcggtcattcgccggaggacgcgggctcggac
gacggcgccgacaatcgcgccgaggcgctgtcgagcgactggtacgacaccggcggcagc
gaaagcaccagcaggctgaacgacgagctcgatgccaattacaccaatgtctttcccgat
gacggtggcccgcagcgcctcgacgcaccggaactcgtcggtcagtggaagtcgatgccg
ggcagcgccgacggcgtcgattacgacctcgacgattttgtcgccggccaggtgtcgctg
cgcgatcatctcgctcagcagatccccttcgtcctgcccgatatgagcgaccggctgatc
gcccagaattttgtcgatcagctcgatgatgccggttacatccaggtcgatcttggcgag
accggcgagcggctcggcacaagcctcacccaggtcgaacacgtgcttgccgccctccag
acgctcgatccgccgggcgttttcgcgcgcagcctcgccgaatgcctggcgatccagctc
aggcagaaggaccgctacgaccctgccatgcaggcgctggtcgaaaatctcgaactgctg
gcgcggcgtgacttcgccacgctgaagcgcctctgcggcgttgatgaggaagatcttctc
gacatgctcggcgagatccgccagctcaacccgaagcccggcagcggtttcgagacgggt
gtttccgaagcgatcatgcccgatgtcgtcgtcaggccctcctcggacggtggctggctg
gtcgagctcaatcccgatacgctgccgcgggtgctggtcaaccagtcctatttttcccgg
gtgaccaggaacggcgaggatcatgccttcctttccgaatgcctgcagagcgccaactgg
ctcacccgcagcctcgatcagcgggcaaagaccatcatgaaggtggcaagcgaaatcgtc
cgccagcaggacgccttcctgctgcacggcgtcgaccacctgcggcctctgaacttgaag
acagtggccgaggcgatcaagatgcatgaatccaccgtcagccgcgtcacctcgaacaaa
tatatgctgacgccgcgcggcctcttcgagctcaaatattttttcaccgtatcgatcggc
gcagtcgagggcggcgacagccattccgccgaggccgtgcgtcacaagatccgcacgctg
atcatgcaggagagcccggacgctgtgctctccgatgacgatatcgtcgacatgctgaag
aagggcggcatcgatctcgcccgccgcacggtggccaaataccgggaggcgatgaacatc
gcttcctcggtccagcgccgccgtgagaagcgggcgctcgccaaggtcgcaggcttctga
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