Rhinopithecus bieti (black snub-nosed monkey): 108516017
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Entry
108516017 CDS
T04641
Symbol
PAN2
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108516017 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108516017 (PAN2)
Enzymes [BR:
rbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
108516017 (PAN2)
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108516017 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
108516017 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_like
WD40_CDC20-Fz
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
108516017
NCBI-ProteinID:
XP_017708760
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG
VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR
QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLTDSSTLLVGGLQNHILE
IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS
DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP
RRAPPVDAEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKESDSEFDSFSQVTESPVGREE
EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEASGKGNLARLIQRWNRFILTQLHQDMQELEVPQAYRGAGGSSFCSSGDSVIGQLFSCE
MENCSLCRCGSETVRASSTLLFTLSYPDDKIGKNYDFAQVLKRSICLDQNTQAWCDNCEK
YQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKKHGGEISKNKEFALA
DWKELGSPEGVLVCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPARAEEE
HGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKH
EAVQLDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTFIPLM
LNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPF
IDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGL
QKDFRVINLMVWQGSFKSLLVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQAETH
DSIEDARTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAA
VFSSVLAL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgagggtctggaccctggactggcagagtatgccccagccatgcattctgcc
ctggaccctgtcctggatgcccacctgaacccaagtctgctacagaatgtggagctggac
ccagagggagtggccttggaggctcttcccgtccaggaatcagtgcacataatggaaggt
gtctactctgaattgcacagcgtggtggctgaagtgggtgtacctgtctctgtctcccac
tttgacttgcacgaggagatgctgtgggtggggagccacgggggccatgccacttccttt
tttggcccagccttggagcgctactcatcctttcaagtcaatggcagtgatgatattcgg
cagatccagagcctggagaatggtatcctttttctcaccaagaacaatctcaagtacatg
gcccgtgggggcctcattatatttgattacctgctagatgagaatgaggatatgcacagt
ctcctactgactgacagcagcactctactcgttggtgggctgcagaatcacatactagag
attgatcttaacactgtccaggagactcagaagtatgcagtagagacgcctggagtcacc
atcatgagacagacaaatcgcttcttcttctgcggccacacgtctggcaaggtttccctg
agagatctccgtacttttaaggtggaacatgagtttgatgccttctcaggaagtctttca
gattttgatgtgcatggcaacctgctagctgcctgcggcttctccagccgcctcactggc
ctggcctgcgaccgtttcctcaaggtgtatgatttgcgcatgatgcgtgccatcacacca
cttcaagtacatgtggatcctgccttcttgcgcttcattcctacatatacttctcgtctt
gctatcatctctcagtcagggcagtgccagttctgtgaacccacaggcctagccaaccca
gcagatatctttcatgtgaatcctgtggggcctctgctaatgacatttgacgtgtcagcc
agcaagcaggccctggcctttggggattctgagggctgtgtgcacctctggactgattcc
ccggagccttccttcaacccctactcccgtgagactgagtttgctttgccgtgtctcgtg
gactcactgcctcctctggactggagccaggacctgctgcctctttccctcatccctgtc
ccactcaccactgacacacttctctctgactggcctgctgccaactctgctccagctccc
aggcgagcaccacctgtggatgcagagattctgcgcaccatgaagaaggtgggcttcatt
ggctacgcacccaatcctcgcaccaagctgcgcaatcagataccttacagactcaaggag
tcagacagtgaatttgacagcttcagccaggtcactgagtcaccagtaggacgagaagag
gagccacatctccacatggtttctaagaaataccgcaaggtgaccatcaaatattccaag
ctaggactggaggactttgacttcaaacactacaataagaccttgtttgctggattagag
ccccacatccccaacgcctactgtaactgcatgatccaggtgctctattttctggagcct
gtacgctgtctaattcaaaaccacctttgccagaaggagttctgtctggcatgtgagctg
ggcttcctctttcacatgttggacctctctcgtggtgacccttgccagggcagtaatttt
cttcgggcattccgtactattcctgaggcctcagcccttggtctgatcctggctgactca
gatgaggcttcaggcaagggcaatctggccaggctcattcagaggtggaatcgcttcatt
ctcactcaactgcatcaagatatgcaggagctggaagtaccacaggcttatcgaggtgct
ggaggcagcagcttttgctcatcgggggactctgttattgggcagctcttcagctgtgag
atggagaactgcagcctctgccgctgtggcagtgagaccgtgcgagcctcatccaccctg
cttttcacactctcctaccctgatgataaaattgggaagaactatgactttgctcaggtg
ctgaagcgaagcatctgcctggaccagaatacacaggcctggtgtgacaactgtgaaaag
taccagcccacgattcagacccgcaacatccgccatctgccagatattctcgtcatcaat
tgtgaggtgaacagctcaaaagaggctgatttctggagaatgcaggccgaggttgccttc
aagatggcagtaaagaaacatggtggggaaatctccaagaacaaggagtttgctttggct
gattggaaggaactagggagtccagagggtgtgctggtatgtccctccattgaggagttg
aagaacgtctggcttcctttctccattcgcatgaagatgaccaagaacaaagggctggat
gtttgcaattggactgatggggatgagatgcagtggggcccagccagggcagaggaggag
catggtgtctatgtgtatgacctgatggctactgtggtacacatcctggactcacgcaca
gggggcagcctggtggctcacatcaaagttggagagacctaccaccagcgcaaggagggc
gttactcaccagcagtggtatctgttcaatgactttcttattgaacctattgataagcat
gaagctgtgcagcttgacatgaattggaaagtacctgcaatcctttattatgtcaaacgg
aatctcaattccagatacaacctgaacatcaagaaccccattgaggcaagtgtcttgctg
gctgaagcctcgctggcacggaagcagcggaaaacacatactacctttattccactgatg
ctgaatgagatgccacagattggggacctggtgggtctggatgctgagtttgtcaccctt
aatgaggaggaagcagagttacgcagtgatggtaccaagtctaccattaaaccaagtcag
atgtcagtagccaggattacctgtgttcggggccagggacctaatgagggtatccccttc
attgatgactacatctctacccaggagcaggtggtggattacttgactcaatactcgggt
ataaagcctggtgacctcgatgccaaaatttcctccaagcacctaacaactctcaagtct
acctacttaaaacttcgttttctcattgacattggagtcaagtttgtgggtcatggcctg
cagaaggacttccgggtcatcaacctgatggtttggcagggctcttttaagagtcttctt
gtgcccaaggaccaagtccttgacactgtctacctgttccacatgccccgaaaacgaatg
atttccctgcgattccttgcttggtactttctggacctgaagattcaagcggaaacccat
gacagtattgaggatgcacgcacagcccttcagctctaccgaaagtatctggagctaagc
aaaaatggcactgagcctgagtctttccacaaggtgctcaagggtctttatgagaagggc
cgaaagatggactggaaggtgcctgagcctgagggccaaacaagtcccaagaatgcagct
gtcttctcctcagtgctggcgctctga
DBGET
integrated database retrieval system
