Rhinopithecus bieti (black snub-nosed monkey): 108522246
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Entry
108522246 CDS
T04641
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04151
PI3K-Akt signaling pathway
rbb04510
Focal adhesion
rbb04512
ECM-receptor interaction
rbb04518
Integrin signaling
rbb04820
Cytoskeleton in muscle cells
rbb04974
Protein digestion and absorption
rbb05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108522246 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108522246 (COL6A6)
04518 Integrin signaling
108522246 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108522246 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108522246 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
108522246 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
108522246 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbb04147
]
108522246 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
rbb00536
]
108522246 (COL6A6)
Exosome [BR:
rbb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108522246 (COL6A6)
Glycosaminoglycan binding proteins [BR:
rbb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108522246 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
108522246 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
108522246
NCBI-ProteinID:
XP_017717819
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MKMLLILFLMIISSHISVNQDSGPEYADVVFLVDSSDRLGSRSFPFVKMFITKMISSLPI
EADKYRVALAQYSDKLHSEFHLSTFKGRSPMLNHLKKNFGFIGGSLQIGKALQEAHRTYF
SAPTNGRDKKQFPPILVVLASSESEDDVEEASKALQKDGVKIISVGVQKASEENLKAMAT
SQFHFNLRTVRDLSMFSQNMTHIIKDVTKYKEGAVDDVFVEACQGPSMADVVFLLDMSIN
GSDENFDYLKGFLEESVSALDIKENCMRIGLVAYSNETKVINSLSMGINKSEVLQHIQNL
SPQTGKAYTGAAIKKLRKEVFSARNGSRKNQGVPQIAVLVTHRDSEDNVTKAAVNLRREG
VTIFTLGIEGASDTQLEKIASHPAEQYVSKLKTFADLAAHNQTFLKKLRNQITHTVSVFS
ERTETLKSGCVDTEEADIYLLIDGSGSTQATDFHEMKTFLSEVVGMFNIAPHKVRVGAVQ
YADSWDLEFEINKYSNKQDLGKAIENIRQIGGNTNTGAALNFTLSLLQKAKKQRGNKVPC
HLVVLTNGMSKDSILEPANRLREEHIRVYAIGVKEANQTQLREIAGEEKRVYYVHDFDAL
KDIRNQVVQEICAEEACKEMKADIMFLVDSSGSIGPENFSKMKTFMKNLVSKSQIGPDRV
QIGVVQFSDINKEEFQLNRFMSQSDISNAIDQMAHIGQTTLTGSALSFVSQYFSPTKGAR
PNVRKFLILITDGEAQDIVKEPAVALRQEGVIIYSVGVFGSNVTQLEEISGRPEMVFYVE
NFDILQRIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDYDEYNIMKNFMIDIVKKA
DVGKNRVQFGALKYADDPEVLFYLDNFGTKPEVISVLQNDQAMGGSTYTAEALGFSDHMF
TEARGSRLNKGVPQVLIVITDGDSHDADKLNATAKALRDKGILVLAVGIADANPVELLAM
AGSSDKYFFVETFGGLKGITSDVTASVCNSSKVDCEIDKVDLVFLMDGSTSIQQTDFKKM
KEFLVSVVQDFDVSPNRVHIGAAQFSDAYRPEFPLGTFIGAKEISFQIENITQIFGNTHI
GAALRKVEHYFRPDMGSRINTGTPQVLLILTDGQSQDEVAQAAEALRHRGIDIYSVGIGD
VDDQQLIQITGTAEKKLTVHNFDELKKVNKRIVRNICTTGGESNCFMDVVVGFDVSTQEK
GQTLLEGQPWMETYLQDILRAISSLNGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSE
NILNSLKDITVKGPSFLNANLLDSLWDTFQNKSAARGKVVLLFSDGLDDDTEKLEQKSDE
LRKEGLNALITVALDGPADSSDLADLPYIEFGRGFEYRTQLSIGMRDLGSRLSKQLVNVA
ERTCCCLFCKCIGGDGSMGDPGPPGKRGPPGFKGSEGYLGEEGIAGERGAPGPVGEQGTK
GCYGTKGPKGNRGLNGQEGEAGESGIDGLNGEQGDYGLPGRKGEKGDEGSQGSPGKRGIP
GDHGAKGLRGDPGAPGVDNNIEGPTGLKGERGREGRRGWPGPPGTPGSRRRTAAHGRRGH
TGPQGTAGIPGPDGLEGSLGLKGPQGPRGEAGAKGEKGGVGSKGPQGPPGPGGEAGNQGH
LGSQGNKGEPGDLGEKGAIGFPGPRGLQGDDGSPGYGSVGRKGAKGQGGFPGESGPKGET
GDPGGPGETGLKGARGKTISAGLPGEMGSPGEPGPPGRKGVKGAKGLASFSTCELIQYVR
DRSPGRRGKTECPVHPTELVFALDQSRDVTEREFERMKEMMAFLVKDIKVRENSCPVGAR
VAILSYNSHARHLVRFSDAYKKNQLLREIEAIPYERSSSSREIGRAMRFISRNVFKRTLP
GVHTRRIATFFSSGQSADSQSITTAAMEFSALEIIPVVITFSNVPSVRRAFAIDDTGTFQ
VIVVPSGADYIPALERLQQCTFCYDVCKPDASCDQARPPPVQSYMDAAFLLDGSRNVGSA
EFEDIRAFLGALLDHFEITPEPETSVTGDRVALLSHAPPDFLPNTQKSPVRAEFNLTTYS
SKRLMKRHVDESVKQLNGDAFIGHALQWTLDNIFLTAPNLRRNKVIFVISAGETSHLDGE
ILKKESLRAKCQGYALFVFSLGPTWDDKELEDLASHPLDHHLVQLGRIHKPDHSYGVKFV
KTFINSIRRAINKYPPINLKIKCNRLNSADPRQPLRHFRSFVPGPYKATLKEDVLQKAKF
FQDKKYLSRVARSGRDDAIQNFIRNTSHTFMNGRRVTKSAPK
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgttgctaattttgttcctcatgataatttcttcccatatttctgtgaaccaa
gattctggccctgagtatgcagatgtcgtgtttctggtggacagctccgatcgcctggga
tccaggtccttcccatttgtgaaaatgttcatcaccaaaatgatcagcagtctccctata
gaggctgacaaataccgcgtggccctcgcccagtacagtgataaacttcacagtgaattc
cacctgagcaccttcaaaggcaggagccccatgctgaaccacctcaagaagaactttgga
ttcattggtgggtccctgcagataggaaaggctcttcaggaggctcacaggacttatttc
tctgcacccacaaatgggagagacaagaaacagtttcccccaattctagtggtcctggct
tcatctgagtctgaggatgatgtggaagaggcttcgaaggccctgcagaaagacggagtg
aaaatcatctccgtaggggtgcagaaagcttctgaggaaaacctgaaggccatggccacg
tctcagtttcatttcaaccttcggacagtcagagacctcagcatgttttcccaaaacatg
acgcacatcatcaaggatgtaacaaagtacaaggagggagcagttgatgacgtctttgta
gaagcttgccaaggcccttctatggccgatgttgtgttcctattggatatgtcaatcaat
ggaagtgacgagaactttgactatcttaaaggattcttggaagaaagtgtatctgccctt
gacataaaggaaaattgcatgaggattggccttgtggcctatagcaatgagacaaaagtg
ataaattcactgagcatgggcataaataagtcagaggttctccagcatatacagaacctt
tctccccagactgggaaggcctatactggagctgccatcaaaaagctcaggaaggaagtc
tttagtgcacggaatggcagtcggaagaatcagggggtgccccagattgccgtgctggtg
acccaccgagattcggaagacaacgtgacaaaagcagctgttaacctccgacgggagggt
gtgaccatcttcaccctgggcatagagggggccagcgacacccagttggaaaagatagca
tcccaccctgctgagcagtatgtctccaaactgaagaccttcgctgacctggctgctcac
aaccagacgtttctgaagaagctgcggaaccaaataacacacacagtctctgtcttttca
gagaggaccgaaacgctcaaatctggttgtgtggacactgaggaagcagacatctatctg
ctcatcgatggctcagggagcacccaggccacagatttccatgaaatgaagaccttcctg
tcagaggtggtagggatgttcaacattgccccccataaggtgcgggttggggccgttcag
tatgctgacagctgggacttggaattcgagatcaataaatactccaacaagcaggatttg
ggaaaggccattgagaatatcaggcagataggtgggaatacaaatacaggtgcagcactg
aatttcacactgagtctgttgcaaaaagcaaagaaacagcgaggaaacaaagttccatgt
caccttgttgtcctgacaaatggcatgtccaaggatagcatcttggagcctgcaaacaga
ctgagagaagagcacatccgagtttatgctatcggggttaaggaggccaaccaaacacag
ctgcgagaaattgcaggagaggaaaagagagtgtattacgtgcatgactttgacgcattg
aaagacataagaaaccaagttgttcaagaaatctgtgctgaagaagcttgcaaagagatg
aaagctgacatcatgtttctggtggacagttctggaagtataggacctgaaaacttcagc
aaaatgaaaacatttatgaaaaacctggtgagcaagtctcagattggaccagatcgggtg
caaattggtgtagtccagttcagtgacatcaataaggaggagtttcagctcaacagattc
atgtcccaaagcgacatttcaaatgcaatagaccaaatggctcacattggacaaaccacc
ctgactggtagtgccctgagctttgtgtctcagtacttcagccccaccaagggcgcccgg
cccaacgtcagaaagtttctcatccttatcacggatggtgaagctcaggacatagtaaag
gaaccagcggtagcgcttcggcaagaaggtgtgatcatctactctgtgggagtgtttggc
tccaatgtcactcagcttgaggagatcagtgggaggcccgagatggttttttatgttgag
aattttgacattctgcagcgcattgaagatgatcttgtttttggaatatgcagcccccgt
gaagaatgcaagcggattgaagttttagatgttgtgtttgtcattgatagctctggcagc
attgactatgatgagtataatatcatgaagaattttatgattgacatagtgaaaaaagct
gatgtgggcaagaatcgggtccagtttggggctctgaagtatgctgatgacccagaggtg
ctgttttatctggataactttggcacaaaaccggaggtaatttcagtgctccagaatgac
caagccatgggtggcagtacttatactgctgaggcactgggcttctcggaccacatgttc
actgaagcccggggcagtcgcctgaacaagggggtcccccaagtcctcattgtgatcacc
gatggggattcccatgatgctgataaactcaatgccacagcaaaggccttgcgagacaaa
ggcattcttgtcctggctgtgggtattgctgatgccaatcccgtggaactgttagctatg
gcaggatcaagcgacaagtacttctttgtggagacttttggaggtctgaagggaataact
tcagatgtgacagccagtgtctgcaactcttcaaaagtagattgtgaaattgacaaagta
gatcttgttttccttatggatggttcaactagcattcagcaaactgacttcaagaaaatg
aaggaatttctggtatccgttgttcaagactttgatgtcagccccaacagagtgcatata
ggagcggcccagtttagcgatgcctatcgcccagagtttccactgggaactttcataggt
gcaaaagagatatcatttcagattgaaaacatcacacagatctttggaaacacgcacatc
ggtgccgcactcaggaaggtggaacattacttcaggccagacatgggcagcaggataaat
acaggtaccccgcaggtgttgctgatccttacagatggccagtcccaagacgaggtggcc
caggccgcggaagccctgagacacagaggtatcgacatctactctgtgggcattggggat
gtggatgaccagcagctcattcagatcaccgggactgcagagaaaaaactgacagtgcac
aacttcgatgaactgaagaaggtcaataaaaggatcgttcgcaacatctgtaccacaggg
ggtgaaagcaactgtttcatggatgttgtggtgggatttgatgtctcaactcaggagaaa
gggcagactttgcttgaaggtcagccttggatggaaacctatcttcaagacatcttacgt
gccatcagctccctcaatggagtaagctgtgaggtgggtacagagactcaggtcagtgtg
gcttttcaagtgacaaatgccatggaaaaatattctcccaagtttgagatctacagtgaa
aacatactgaatagcttgaaggatataacagttaaaggaccatcgtttctcaatgcaaac
ctcttggattctctatgggatacatttcagaataaatcggctgctcgaggaaaggtggtc
cttttattttcagatggattggatgatgatactgagaaacttgaacaaaaatctgatgaa
cttagaaaagaaggcctgaatgcactcataactgttgctctggatggacctgctgattca
agtgacttggctgatcttccctacattgaatttgggagaggatttgagtacaggacgcag
ctctctattggcatgagagatcttgggagccgtctgtcaaagcagctagtcaacgttgct
gaaaggacatgctgctgtttgttctgcaagtgcattggaggagatggctcaatgggggat
cctggaccaccagggaaaaggggacctccaggttttaaaggcagtgaaggctacctggga
gaggagggaatcgctggagaaagaggagctcctggaccagtgggagagcaaggtactaag
ggatgctatggcaccaaaggtcctaagggaaacaggggactaaacggacaggagggagaa
gctggggaaagtggaattgatggactaaacggagaacagggtgattatggtcttcctgga
agaaaaggagaaaagggtgatgagggatcccagggaagcccagggaagagagggattcct
ggtgaccatggagcaaagggcctgcgaggggaccccggggctcctggagttgataataac
atagaaggacccacaggcttgaaaggagaacgtggaagagaaggtagaagaggctggcca
ggcccccccgggacaccaggctccagaagaaggacagcagctcatggcagaaggggacat
acaggtccacagggaacagcaggcatcccaggaccagatggacttgaaggctccctggga
cttaagggccctcagggcccaagaggagaggctggtgcgaaaggagaaaaaggaggtgtg
ggaagtaaaggtccccagggacctccaggacccggaggagaggcagggaatcaaggccat
ttgggaagccaaggaaataaaggtgaacctggagatctgggagaaaaaggagctattggc
tttcctggtcctcgtggcttgcagggcgatgatggcagtccaggttatggtagtgttgga
cgcaaaggagcaaagggacaaggaggattccctggagaaagtggacctaagggtgagact
ggggaccctggtggtccaggagagactgggctgaagggagctagaggcaaaacgatatct
gctgggcttccaggagagatgggatcccctggggaaccaggacctcctggacgtaagggt
gtgaaaggagccaaaggcttggcttcattttctacatgtgagctcattcagtatgtgcga
gaccgcagtcctggcagacgtggaaaaaccgaatgcccagtgcacccaactgagttagtg
tttgccctggaccagtcccgggatgtcactgagcgggaattcgagcggatgaaggagatg
atggctttcctggtgaaagacattaaagtccgggagaacagctgccccgtgggagcgcgc
gtagccatcctctcctataactcccacgccaggcacctcgtgcgcttctcagatgcctac
aagaagaatcaacttctcagggaaattgaagctattccttatgagagatcctcttccagc
cgggagattggcagagcaatgcggtttatttccaggaatgtcttcaagcggacgcttccg
ggggtgcacacgagaagaattgccacatttttcagcagcggtcagtctgcggattcccag
tccatcactacggctgccatggagttcagcgcgcttgaaatcattcccgtggtgatcact
ttcagcaacgtgccttcggtcaggcgtgcatttgcgattgacgacactggcacatttcaa
gtaatagtggttccctctggagccgactacataccagcattagagagactccagcagtgc
actttctgctacgatgtatgcaagccagatgcttcttgtgaccaagccagaccaccccct
gtgcaatcttacatggatgctgctttccttctggatggctcccggaacgtgggaagtgct
gaatttgaagacataagagctttcctgggagcactattagatcactttgaaatcacccca
gagccggagacttctgtcactggagaccgggtggccctattgagccatgctccccccgac
ttcctacccaacactcagaagagtccagttagagctgagttcaatcttaccacctatagc
agtaagcgcctcatgaagaggcatgtggatgagtcagttaaacaactaaatggagatgct
tttattggtcatgccttacagtggactctggacaatatctttttaactgcacccaatctg
agaagaaacaaagtcatatttgtgatatctgctggggaaaccagccacttagatggggaa
atcttaaagaaggaatctttgcgagccaaatgtcaagggtatgccctatttgtgttttcc
cttggccctacttgggatgacaaggaactggaggatctcgctagccaccctttggatcac
cacctggtccagcttggccgaattcataaacctgaccacagttatggtgtgaagtttgtg
aagacctttataaactcaatcaggcgtgcaatcaacaaatatccaccaataaacttaaaa
ataaagtgcaatagacttaactctgcagatccaaggcagcccctgcgacatttccgaagc
tttgttcctggaccatataaagctactctcaaagaagatgtattacagaaggcaaaattc
tttcaagataaaaaatatctttcaagagtagcaagaagtggcagagatgatgctattcaa
aattttatcagaaacacctcccatacctttatgaatggaagaagggtgacaaaaagtgct
cccaaatga
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integrated database retrieval system
