Rhinopithecus bieti (black snub-nosed monkey): 108533906
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Entry
108533906 CDS
T04641
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108533906 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108533906 (CNOT1)
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108533906 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108533906 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
108533906
NCBI-ProteinID:
XP_017734431
LinkDB
All DBs
Position
Unknown
AA seq
2148 aa
AA seq
DB search
MDRILPDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLG
MMARTHSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFK
EVTYELDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLIN
PEIFCFADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSF
PIKHCPDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIR
QLIMHAMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYL
KLDKWLTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACL
QACAGSVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLA
GMTSLSIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQ
LPVGGLGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPE
ANQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNL
FEEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGI
AALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSI
ALAQAQAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNI
DTLLVATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLV
MKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNL
GHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPP
NPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQ
LSAPKKDVKQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYSLAGLAPHIT
LNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEES
RMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQL
AQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPE
QIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKC
ITELEQHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSG
ADADLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNH
LVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRIN
AHSRGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYL
LREWVNLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVE
ISYRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLG
IVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRP
TKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPM
QILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTP
NLKVDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGN
RYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLN
AIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIE
LIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atggacaggatcctgcctgattccggaggggtagctaaaaccatgatggagagctctttg
gctgattttatgcaagaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaat
ataatcatgcagtttggtgttcgggaggtcacagctgcccaggttgcaagggttttggga
atgatggctcgaactcattcaggattaacagatggcattccattacagagtatttctgct
ccgggcagtgggatctggagtgatgggaaagataaaagtgatggagcacaggcacacacg
tggaatgtagaagtcttgattgatgttcttaaagaactgaatccgagtttgaatttcaag
gaagtaacttatgaactggaccatcctggatttcaaattcgtgacagtaaaggacttcat
aatgtggtttatggcattcagaggggtttgggtatggaagtgttcccagtagacctgata
tatagaccttggaaacacgctgaaggccagctctccttcattcaacattcccttataaat
ccagagattttctgttttgctgactatccctgtcatactgttgccactgatattctgaaa
gcaccaccagaggatgacaatcgagaaattgccacatggaagagcttggatttgattgaa
tctctgctgaggcttgcagaggttgggcagtatgagcaagtcaaacagctcttcagcttc
cctatcaaacactgtccagacatgctggtattggccttactacagattaacacctcttgg
cataccttgcgccatgaacttatctccactctgatgccaattttccttggaaaccatcct
aactcagctattattttgcactatgcatggcatgggcagggacagtctccctcaattcgc
caacttatcatgcatgcaatggcagaatggtacatgagaggggagcagtatgatcaggcc
aaattgtctcgaatacttgatgtggcccaggacttgaaggccttgtcaatgctgctaaat
ggtactccatttgcctttgttattgaccttgctgcacttgcttcacgtcgtgaatacctc
aaacttgataagtggctcacagataaaattcgagagcatggggagccttttatccaggcg
tgtatgacttttttaaagagacggtgtccttctattttgggtggacttgccccagaaaaa
gaccagcccaaaagtgctcaacttcctccagaaactctggcgacaatgttggcctgtctg
caagcttgtgcggggagtgtttctcaggaactatcggaaactatcctcaccatggtagcc
aattgcagtaatgttatgaataaggccagacaaccaccacctggagttatgccaaaaggc
cgtcctcctagtgctagcagcttagatgccatttctcctgttcagattgaccctcttgct
ggaatgacatctcttagtataggtggttcagctgcccctcacacccagagtatgcagggt
tttcctccaaatttgggttctgcattcagtacccctcagtcaccagcaaaagcatttcca
cccctttcaacccccaatcaaaccactgcattcagtggtattggaggactttcatcacag
cttccagtaggtggtcttggcacaggcagcctgactggtataggaactggtgctcttgga
ctccctgcagtgaataacgacccttttgtacagaggaaattgggcacctctggactgaat
cagcctacattccagcagagtaagatgaaaccttcggacttgtctcaggtgtggccagag
gcaaaccagcactttagtaaagagatagatgatgaagcaaacagctattttcagcgaatc
tataatcatccaccacatccaaccatgtctgttgatgaggtattagaaatgctgcagaga
tttaaagactctactataaagagggaacgagaagtgtttaactgtatgctaaggaacttg
tttgaagaataccgtttttttccccagtatcctgataaagagttacatataacagcctgc
ctgtttggtggtataattgagaaaggactggtcacttacatggcactaggcctggctcta
cgatatgttcttgaagccttacgcaagccttttggatccaaaatgtattattttgggatt
gctgcgctagatagatttaaaaacagattgaaggactatccccagtattgtcagcatttg
gcttctatcagtcactttatgcaatttccacatcatttacaggagtatattgagtatgga
cagcagtctagagatcctcctgtgaaaatgcaaggctctatcacaacccctggaagtatt
gcactggctcaggcccaggctcaggcccaggttccagcaaaagctcctcttgctggtcaa
gttagcactatggttaccacctcaacaaccaccactgttgctaaaacggttacagtcacc
aggccaactggagtcagctttaagaaagatgtgccaccttctattaatactacaaatata
gatacgttgcttgtagccacagatcaaactgagagaattgtggagcccccggaaaatatc
caggagaaaattgcttttattttcaataatctctcacagtcaaatatgacacaaaaggtt
gaagagctgaaggaaaccgtgaaagaagaatttatgccttgggtttcgcagtatctggtt
atgaagagagtcagtattgagccaaactttcatagcctgtattcaaacttccttgacacg
ctgaagaatcctgaatttaacaagatggttctgaatgagacctacagaaacattaaagtg
ctcctgacctcagataaagctgcggccaatttctcagatcgttctttgctgaagaacttg
ggacattggctaggaatgatcacattagctaaaaacaaacccatcttacacactgacttg
gatgtgaaatcattgctgctagaggcttatgttaaaggtcaacaagaattgctctacgtg
gtgccctttgttgccaaagtcttagaatctagcattcgtagtgtggtttttaggccacca
aacccttggacaatggcaattatgaatgtattagctgagctacatcaggagcatgactta
aagttaaacttgaagtttgaaattgaggttctctgcaagaaccttgcattagacatcaat
gagctaaaacctggaaacctcctaaaggataaagatcgcctgaagaatttagatgagcaa
ctctctgctccaaagaaagatgtcaagcagccagaagaactccctcccatcacaaccaca
acaacttctactacaccagctaccaacaccacttgtacagccacggttccaccacagcca
cagtacagctaccatgacatcaatgtctattcccttgcaggcctggcaccacacattact
ctaaatccaacaattcccttgtttcaggcccatccacagttgaagcagtgtgtgcgtcag
gcgattgaacgggctgtccaggagctggtccatcctgtggttgatcgatcaattaagatt
gccatgactacttgtgagcaaatagtcaggaaggattttgctctggattcggaggaatct
cgaatgcgaatagcagctcatcacatgatgcgtaacttgacagctggaatggctatgatt
acatgcagggaacctttgctcatgagcatatctaccaacctaaaaaacagttttgcctca
gcccttcgtactgcttccccacaacaaagggaaatgatggatcaggcagctgctcaatta
gctcaggacaattgtgagttggcttgctgttttattcagaagactgcagtagaaaaagca
ggccctgagatggacaagagattagcaactgaatttgagctgagaaaacatgctaggcaa
gaaggacgcagatactgtgatcctgttgttttaacatatcaagccgaacggatgccagag
caaatcaggctgaaagttggtggtgtggacccaaagcagttggctgtttacgaagagttt
gcacgcaacgttcctggcttcttgcctacaaatgacttaagtcagcccacaggattttta
gcccagcccatgaagcaagcttgggcaacagatgatgtagctcagatttatgataagtgt
attacagaactggaacagcatctacatgccatcccaccaactttggccatgaaccctcaa
gctcaggctcttcgaagtctcttggaggttgtagttttatctcggaactctcgggatgcc
atagctgctcttggattgctccaaaaggctgtagagggcttactagatgccacaagtggt
gctgatgctgacctgctgctgcgctacagggaatgccacctcttggtactaaaagctctg
caggatggccgggcatatgggtctccatggtgcaacaaacagatcacaaggtgcctaatt
gaatgtcgggatgaatataaatataatgtggaggctgtggagctgctaattcgcaatcat
ttggttaatatgcagcagtatgatcttcatctagctcagtcaatggagaatggcttaaac
tacatggctgtggcattcgctatgcagttagtaaaaatcctgctggtggatgaaaggagt
gttgctcatgttactgaggcagatctgttccacaccattgaaaccctcatgaggattaat
gctcattccagaggcaatgctccagaaggattgccccagctgatggaagtagtgcgatcc
aactatgaagcaatgattgatcgtgctcatggaggcccaaactttatgatgcattctggg
atctctcaagcctcagagtatgatgaccctccaggcctgagggagaaggcagagtatctt
ctgagggaatgggtgaatctctaccattcagcagcagctggccgcgacagtaccaaagct
ttctcggcgtttgttggacaggtagagcttttggaaagaaagatgcaccagcaaggaata
ctgaagaccgatgatctcataacaaggttctttcgtctgtgtactgaaatgtgtgttgaa
atcagttaccgtgctcaggctgagcagcagcacaatcctgctgctaatcccaccatgatc
cgagccaagtgctatcacaacctggatgcctttgttcgactcattgcactgctcgtgaaa
cactcaggggaggccaccaacactgtcacaaagattaatctgctgaacaaggtccttggt
atagtagtgggagttctccttcaggatcatgatgttcgtcagagtgaatttcagcagctt
ccctaccatcgaatttttatcatgcttctcttggaactcaatgcacctgagcatgtgttg
gaaaccattaatttccagacacttacagctttctgcaatacattccacatcttgaggcct
accaaagctcctggctttgtatatgcctggcttgaactgatttctcatcggatatttatt
gcaagaatgctggcacatacgccacagcagaaggggtggcctatgtatgcacagctactg
attgatttattcaaatatttagcgcctttccttagaaatgtggaactcaccaaacctatg
caaatcctctacaagggcactttaagagtgctgctggttcttttgcatgatttcccagag
ttcctttgtgattaccattatgggttctgtgatgtgatcccacctaattgtatccagtta
agaaatttgatcctgagtgcctttccaagaaacatgaggctccctgacccattcactcct
aatctaaaggtggacatgttgagtgaaattaacattgctccccggattctcaccaatttc
actggagtaatgccacctcagttcaaaaaggatttggattcctatcttaaaactcgatca
ccagtcacttttctgtctgatctgcgcagcaacctacaggtatccaatgaacccgggaat
cgctacaacctccagctcatcaatgcactggtgctctatgtcgggactcaggccattgca
cacatccacaacaagggcagcacaccttcaatgagcaccatcactcactcagcacacatg
gatatcttccagaatttggctgtggacttggacactgagggtcgctatctctttttgaat
gcaattgcaaatcagctccggtacccaaatagccacactcactacttcagttgcaccatg
ctgtacctttttgcagaggccaatacggaagccatccaagaacagatcacaagagttctc
ttggaacggttgattgtaaataggccacatccttggggtcttcttattaccttcattgag
ttgattaaaaacccagcatttaagttctggaaccatgaatttgtacactgtgccccagaa
atcgaaaagttattccagtcggtcgcacagtgctgcatgggacagaagcaggcccagcaa
gtaatggaagggacaggtgccagttag
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integrated database retrieval system
