KEGG   Rhodocyclaceae bacterium Thauera-like: B4966_04820
Entry
B4966_04820       CDS       T05394                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rbh  Rhodocyclaceae bacterium Thauera-like
Pathway
rbh00230  Purine metabolism
rbh00240  Pyrimidine metabolism
rbh01100  Metabolic pathways
rbh01232  Nucleotide metabolism
Module
rbh_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rbh_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rbh00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    B4966_04820
   00240 Pyrimidine metabolism
    B4966_04820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rbh03400]
    B4966_04820
Enzymes [BR:rbh01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     B4966_04820
DNA repair and recombination proteins [BR:rbh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    B4966_04820
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN RNR-II_ins_dom A2L_zn_ribbon
Other DBs
NCBI-ProteinID: AUL99568
LinkDB
Position
complement(1019522..1022386)
AA seq 954 aa
MSATTHTRAGGEIDASTLAPQEISGEVLIEKYAKGEEKTITEVRRRVARALAAVEAEDKR
AYWEAKFLDAQEKGFVPAGRINSAAGTKLQATLINCFVQPVGDSVTEAVDGRPGIYTALA
QAAETMRRGGGVGYDFSAIRPKGALVRGTQSNASGPVSYMRVFDRSCETVESAGARRGAQ
MGVLRCDHPDIEEFIHAKDHGDLTNFNISVGVTDTFMQAVEVDGTVELLHKAEPSDELKD
AGAYQREDGLWVYRKVRARELWDQIMRSTYDHAEPGILFLDRMNADNNLYYCETIEATNP
CAEQPLPPYGCCCLGSINLTLFVKNPFSAQAEFDYPAFGKVIDTSIRMLDNVLDVTHWPL
EQQAQEAAAKRRVGLGFTGLGDALIMLTKRYDSAEAREEARKIAEYMRNRAYLASVELAR
ERGPFPLFNADLYLSGGNFASRLPAEVKDKIRKHGIRNSHLLSIAPTGTISLAFADNASN
GIEPPFSYTYTRRKRMADGTFKEYAVEDYAWRLYRHLGGDVDKLPAYFVTALEISAQAHK
DMVAAVAPYVDTSISKTVNVPADYPYAEFEDLYLTAWKAGLKGLATYRPNSVLGSVLSVT
PSAEQKQPHDVEIADANKRLSIKSLPAPVLSSLRWPGRPELPDGNMAWTYMLNTPSGDFA
LFVGQLGTNGGTFPFEVWVNGADQPRGLGAVAKTLSMDMRANDRAWLKLKLDTLARTVGE
KSFEMPFPPHGEKKLMPGAVSAFAQVVRYRCEQLGSFDSEGASPVLETLFSLEEPKTGTD
GTLSWTVDIYNPATGEDFVLGLKEITLPDGVTRPYSVWLSGNYPRALDGLTRILSLDMRV
MDPAWIGMKLRKLLDYPEPLGDFMAFIPGTKRQQNYPSTVAYIAQLMIHRYAMLGVLDEK
GYPTREMGILESPRNDSEPRLMQGALCTECGNHTVIRKDGCDFCTACGAVGTCG
NT seq 2865 nt   +upstreamnt  +downstreamnt
atgagcgctaccacccacacccgggcgggcggcgagatcgatgcctccacgctcgctccg
caagaaatttccggcgaagtgctgatcgagaaatacgccaaaggagaagaaaagacgatc
accgaagtgcgtcgccgggtggcacgtgcactggctgcggtcgaagccgaagacaagcgc
gcctactgggaagccaaatttctcgacgcccaggaaaaaggctttgtacccgccgggcgg
atcaacagcgccgccggcaccaagttgcaggccacgctgatcaactgcttcgtccagccg
gtaggcgattcggtgactgaggcggtcgatggccgtccgggcatctacaccgcactggcg
caggcggccgaaaccatgcgccgtggtggcggcgtgggctatgacttctccgccatccgc
cccaagggggcgctggtcaggggcactcaatcgaacgcctccggaccggtgtcctacatg
cgggtgttcgaccgttcctgcgaaaccgtggaatcggccggtgcgcgccgcggcgcgcag
atgggcgtgctgcgctgcgatcacccggacatcgaagaattcatccacgccaaggaccac
ggcgatttgaccaatttcaacatctcggtgggcgtaaccgataccttcatgcaagcggtg
gaggtcgacggcacggtggaactgctgcacaaggccgaaccttcggacgaactcaaggac
gccggcgcctaccaacgtgaggacgggctgtgggtgtatcgtaaggtgcgcgcgcgcgag
ttgtgggaccagatcatgcgttcaacctacgaccacgccgaaccgggcattctgttcctc
gaccgcatgaacgcggacaacaacctgtactactgcgaaaccatcgaggccaccaaccct
tgtgccgaacagccgctaccgccctacggttgctgctgcctgggatcgatcaacctcacc
ctgttcgtcaagaacccattttctgcgcaggccgagttcgactatccagccttcggcaag
gtcatcgacacctcgatccgtatgctcgacaacgtgctcgatgtcacccactggccgctc
gaacaacaggcccaggaagcggccgccaagcgccgtgtcggtctgggctttaccgggctg
ggcgacgccctgatcatgctgaccaagcgctatgacagcgccgaagcccgcgaagaagcg
cgcaagattgccgaatacatgcgcaatcgcgcctatctggcgtcggtggagctggcgcgg
gagcgcggccccttcccgctgttcaacgccgatctttatctgtcgggcggcaacttcgcc
tcacgcctgccggccgaggtgaaagacaaaatccgcaagcacggcattcgcaactcgcac
ctgctgtcgatcgcgcccaccggcaccattagcctggcctttgccgacaacgcctccaac
ggcatcgagccgccgttctcctacacctatacccgccgtaagcgcatggccgacggcaca
ttcaaggagtacgcggtcgaagactacgcctggcgtctgtaccgccacctcggcggcgat
gtcgacaagctgccggcgtatttcgtgactgccctggaaatctccgcccaggcgcacaaa
gatatggtggcagcggtcgccccctatgtggacacctccatctccaaaacggtcaacgtg
cccgccgactacccctacgccgagttcgaagacctctacctcaccgcctggaaggccggc
ctcaagggtttggccacttatcgacccaactcggtgctgggctcggtgctgtcggtgacg
cccagcgccgaacaaaagcaaccgcacgatgtggaaattgccgacgccaacaagcgtcta
tccatcaagagcctgcccgctccggtgctgtccagtctgcgctggccgggtcggccggag
ttgcccgatggcaacatggcctggacttatatgctcaacaccccgagcggcgatttcgcg
ctctttgtcgggcagcttggcaccaacggcggcactttcccgttcgaggtgtgggtcaat
ggcgccgatcagccgcgcggcctgggcgcggtggccaagacgctgtcgatggatatgcgc
gccaatgatcgggcctggctcaaactcaagctcgacacgctggcccgcaccgtaggcgaa
aaatccttcgaaatgcccttcccgccgcatggcgagaagaaactgatgcctggcgcggta
tcggcttttgcccaagtggtgcgttaccgctgcgagcagctcggcagcttcgacagcgag
ggtgctagcccggtgctggaaactctgttcagtctggaagagcccaagaccggtaccgat
ggcaccctgtcctggacggtggacatctacaacccggccaccggcgaagattttgtgctg
ggcctcaaggagatcaccctgcccgatggcgtcacccgtccgtactcggtgtggctctcg
ggcaactatccgcgcgcgctcgacgggctgacccgcatcctgtcgctcgacatgcgcgtc
atggacccggcgtggatcggcatgaaactgcgcaagttgctcgactacccggagccgctg
ggcgacttcatggccttcatcccgggcaccaagcgtcagcaaaactaccccagcaccgtg
gcctacatcgcgcagttgatgattcaccgctacgccatgctcggcgtgctcgacgaaaag
ggctatccgacccgcgaaatgggcatcctggagtccccgcgcaacgatagcgaaccccgc
ttgatgcagggcgccttgtgcaccgagtgcggcaaccacaccgtgatccgcaaagacggc
tgcgacttttgcaccgcctgcggcgcagtaggcacctgcggctga

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