Rhizobium binxianense: PO860_06580
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Entry
PO860_06580 CDS
T11088
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rbin Rhizobium binxianense
Pathway
rbin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PO860_06580 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbin03021
]
PO860_06580 (rpoB)
03400 DNA repair and recombination proteins [BR:
rbin03400
]
PO860_06580 (rpoB)
Enzymes [BR:
rbin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PO860_06580 (rpoB)
Transcription machinery [BR:
rbin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PO860_06580 (rpoB)
DNA repair and recombination proteins [BR:
rbin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PO860_06580 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
WEA61525
LinkDB
All DBs
Position
1324049..1328188
Genome browser
AA seq
1379 aa
AA seq
DB search
MAQTLSFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPKGGRPDEGLQAVFK
SVFPITDFSGASMLEFVSYEFEPPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQSVYMGDMPLMTNNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLMALGMDGEEILDTFYTKSLYKR
DGEGWRIPFKPETLKGAKAITEMVDADTGEVVVEAGKKLTPRLLRQLSDKGLKALKAADD
DLYGNYLAGDIVNYSTGEIYLEAGDEIDEKTLGVILANGFDEIPVLGIDHINVGAYIRNT
LSADKNENRQDALFDIYRVMRPGEPPTMESAEAMFNSLFFDAERYDLSAVGRVKMNMRLD
LTVEDTVRILRKDDILAVVKMLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRRIVDGKVTSDVLYLSAMEEAKYYVAQANAEMNADGSFVDEFVVCRHAGEVMLAPRDSM
NLMDVSPKQVVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPVVAR
DSGAAIGARRGGVVDQVDATRIVIRATEDLEAGKSGVDIYRLQKFQRSNQNTCVNQRPLV
TVGDVVNRGDILADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILLSERIVADDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTYGTIVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYGRLIEMLRGQASIAGPKGFKKGTELSNAVVSEYPRSQWW
MFAVEDEKVQSELEALRGQYDESKSRLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHLG
WACAGMGRQIGELIEAYKANGNIEPLRKTIGDVVGDGPKAEQVHEFDDESVLRLADQWKR
GVSIATPVFDGAHEGDVNDMLRLAGLKDTGQSTLYDGRTGEQFDRQVTVGYIYMLKLNHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELENTKLDEAQAAQLPDAAE
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctttcgttcaacggtcgcaggcgcgtacgcaagttttttggtaagatc
cccgaagtcgcagaaatgccgaacctcatcgaggttcagaaggcgtcctacgaccagttt
ttgatggttgaagagccgaaaggcggccggcccgacgagggtcttcaggccgttttcaag
tcggttttcccgatcaccgatttctccggcgcttccatgctggaattcgtgtcctacgag
ttcgaaccgccgaagttcgacgttgacgaatgccgtcagcgcgacctgacctatgcagcg
cccctgaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggataccggcgcgaag
tcgatcaaggacatcaaggaacagtccgtttacatgggcgacatgccgctcatgaccaat
aacggcacgttcatcgtcaacggcaccgagcgcgtgatcgtctcccagatgcatcgttcg
ccgggcgtcttcttcgaccacgacaagggcaagagccattcttccggcaagctgctcttt
gctgcccgcgtcatcccctatcgcggttcctggctcgacatcgaattcgacgccaaggat
atcgtttacgcccgtatcgaccgccgccgtaagatccctgttacgtcgctcctgatggcg
ctcggcatggacggcgaggaaatcctcgataccttctacacgaagtcgctctacaagcgc
gacggcgaaggctggcgtattcccttcaagccggaaacgctgaagggtgccaaggcgatc
accgagatggtcgacgccgataccggcgaagtcgtcgtcgaagccggcaagaagctgacc
ccgcgcctgctgcgccagctctccgacaagggcctgaaggcgctgaaagccgccgatgac
gatctctacggcaactaccttgccggcgacatcgtcaactactcgacgggcgagatctat
ctcgaagccggcgacgaaatcgacgagaagacgcttggggtcatcctggcaaacggtttc
gacgagatcccggttctcggcatcgaccacatcaatgtcggcgcctacatccgcaacacg
ctgtctgccgataagaacgagaaccgccaggacgctctgttcgacatctaccgcgtcatg
cgtccgggtgaaccgccgaccatggaatcggccgaagccatgttcaattcgctgttcttc
gatgcggagcgttacgacctctccgccgtcggccgcgtcaagatgaacatgcgtctcgac
ctgacggtggaagacaccgtccgcatcctgcgtaaggacgacatcctggccgtggtcaag
atgctggtcgaactgcgcgacggcaagggcgagatcgacgacatcgacaacctcggcaac
cgccgcgtccggtcggtcggcgagctgatggaaaaccagtaccgtctcggcttgctccgc
atggagcgcgcgatcaaggaacgcatgtcctcgatcgagatcgacacggtcatgccgcag
gacctgatcaacgccaagccggcggctgccgccgttcgcgaattcttcggttcctcgcag
ctctcgcagttcatggaccaggtcaacccgctctcggaaatcacccacaagcgccgtctt
tcggcgcttggcccgggtggtctgacccgtgagcgcgccggcttcgaagtccgcgacgtg
catccgacccactacggccgtatttgcccgatcgaaacgcctgagggaccgaacatcggt
ctcatcaactcgcttgcgacctttgcccgcgtcaacaagtacggcttcatcgaaagccca
taccgtcgcatcgtcgacggcaaggtgacgagcgacgtgctctacctctccgccatggaa
gaggcgaagtactacgtcgcccaggccaacgccgaaatgaacgctgacggttccttcgtc
gacgagttcgtcgtctgccgtcatgccggcgaagtcatgctcgcgccgcgcgacagcatg
aacctgatggacgtttcgccgaagcaggtcgtttcggttgcagccgcgctcattccgttc
ctggaaaacgacgacgccaaccgcgcgctcatgggttcgaacatgcagcgtcaggctgtg
ccgctgctgcgtgccgaagccccgttcgtcgggaccggcatggagccggttgtcgcccgt
gactcgggcgctgccatcggcgcccgccgcggcggtgtggtcgaccaggtcgacgcgacg
cgtatcgttatccgcgccaccgaagacctcgaagccggcaaatccggcgtcgatatctac
cgcctgcagaagttccagcgctcgaaccagaacacctgcgtcaaccagcgtccgctggtc
accgtcggtgacgtcgtcaaccgcggcgacatcctcgccgacggcccgtcgaccgatctc
ggcgatctggcgctcggccgcaacgcgctcgtcgcgttcatgccctggaacggctataac
tacgaagactcgatcctgctctccgagcgcatcgttgccgacgacgtgttcacctccatc
cacatcgaagaattcgaagtgatggcacgcgacaccaagctcgggcctgaggaaatcacc
cgcgatattccgaacgtttcggaagaagcgctgaagaacctcgacgaagccggcatcgtc
tatatcggcgccgaagttcagccgggcgatatcctcgtcggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggcgaaaaggcctcc
gacgtgcgcgatacgtcgatgcgcatgccgcccggcacctacggcacgatcgtcgaagtt
cgcgtcttcaaccgccatggcgtcgagaaggacgagcgcgcgatggcgatcgagcgcgaa
gaaatcgagcgtcttgcgaaggaccgcgacgacgagcaggcgatcctcgaccgtaacgtc
tacggccgtctgatcgaaatgctgcgcggccaggcgtccatcgccggcccgaagggcttc
aagaagggcaccgagctttcgaacgccgtcgtctccgaatatccccgctcgcagtggtgg
atgttcgcggtcgaggacgagaaggtccagagcgaactcgaagcgctccgcggccagtac
gacgaatccaagtcgcgccttgaacagcgcttcatggacaaggtcgagaaggtccagcgc
ggcgatgaaatgcctcctggcgtcatgaagatggtcaaggtcttcgtcgctgtgaagcgc
aagatccagccgggcgacaagatggccggccgtcacgggaacaagggcgtcgtctcgcgc
attgtgccggtggaggacatgccgttcctcgaagacggcacgcatgtcgacgtcgttttg
aacccgctcggcgtgccttcgcgcatgaacgtcggccagatcctcgaaacccacctgggt
tgggcctgcgccggcatgggtcgccagatcggcgagctgatcgaagcctacaaggccaat
ggcaacatcgagccgctgcgcaagaccatcggcgatgtcgtcggtgacggtccgaaggcc
gaacaggtccacgagttcgacgacgagtcggtcctgcgtctcgccgaccagtggaagcgc
ggcgtttcgattgcgacgcctgttttcgacggtgcgcatgaaggcgacgtcaacgacatg
ctgcggctggcaggtctcaaggataccggtcagtcgacgctctatgacggccgtaccggc
gagcagttcgaccgtcaggtgacggtgggctacatctacatgctgaagctcaaccacctg
gtcgacgacaagatccatgcccgttcgatcggtccttactcgctcgtgacccagcagccg
ctgggcggcaaggcgcagttcggcggccagcgcttcggcgaaatggaagtctgggcgctc
gaagcatacggtgctgcctacacgctgcaggaaatgctgacggtgaagtcggacgacgtc
gcgggccgcaccaaggtctacgaagccatcgtccgcggagacgacacgttcgaagccggt
attccggaaagcttcaacgttctcgtcaaggaaatgcgctcgctgggcctcagcgtcgag
ctcgaaaacaccaagcttgacgaggcgcaggcagctcagctgcccgacgcggccgagtaa
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