Rahnella bonaserana: QNM34_10310
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Entry
QNM34_10310 CDS
T09076
Name
(GenBank) oligogalacturonate lyase family protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00040
Pentose and glucuronate interconversions
rbon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
QNM34_10310
Enzymes [BR:
rbon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
QNM34_10310
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
Tricorn_2nd
DPPIV_N
Motif
Other DBs
NCBI-ProteinID:
WHZ42622
LinkDB
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Position
complement(2272134..2273315)
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AA seq
393 aa
AA seq
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MAKGSQIQFNFHTVQDAQTGARVTRLTPPDVLCHRNYFYQKCFTRDGGRLLFAGEFDGHR
NYYLLDLQTQNAVQLTEGEGDNTFGGFLSPDDQFLYYVKNERSLQRVKLADFSEQTVYTV
PEDWVGYGTWVANSECTSLVGIEISREDWTPLSDWKIFQEFYHSHPHCRLLRVDLINGKS
RVIHEKNEWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWLVNEDGSNVRKVKEHAPGESC
THEFWVPDGSALMYVSYLKGQHDRHIRRFDPQTGEDSCLMTMPACSHLMSNENGTLLVGD
GSGTPVDVKDTASHTIENDPWLYIFDAKTRQHAQLVAHNSSWRVLDGDRQVTHPHPSFSP
DDRHVLFTTDYEGLPALYLAEIPDALLSSLRKD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggttctcagattcaattcaatttccacaccgttcaggacgcacagaccggc
gcgcgcgtgacgcgtctgacaccgcccgatgtgctttgccatcgcaactatttctatcag
aaatgctttacccgcgacggcggcaggctgctgtttgccggtgagtttgatggccaccgc
aattactatctgctggatctgcagacccaaaatgcggttcagttaacggaaggcgaaggt
gacaataccttcggtggcttcctttcacccgacgatcagtttctgtattacgtgaaaaat
gagcgcagtttgcagcgtgtaaaactcgccgacttcagcgagcaaaccgtttataccgta
ccggaagattgggtcggatacggcacctgggtcgcgaacagtgaatgcaccagtctggtg
ggcattgagatcagtcgtgaagactggacaccgttatctgactggaaaatctttcaggag
ttttatcatagtcatccccactgccgcctgctgcgtgtcgatctcattaatggtaagtcc
cgcgtgatacacgaaaagaatgaatggctcggtcatccgatataccgaccttttgatgat
aataccgtcgcgttctgtcatgaaggcccgcatgatctggtagatgcccgcatgtggctg
gtaaatgaggatggcagcaatgtgcgtaaggtgaaggagcatgcaccaggtgaaagctgt
acgcacgaattctgggtgccggacggctccgcgctgatgtatgtgtcttatctgaaaggc
cagcacgaccgtcatatccgccgctttgatccgcagaccggtgaagatagttgcctgatg
accatgcccgcgtgttcacacctgatgagcaatgaaaatggaacgctgctggtcggcgac
ggttccggcacgccggtagatgtgaaagataccgccagccatacgattgaaaacgatcca
tggctgtatatttttgacgccaaaacccgccagcatgcccagcttgtggcgcacaacagt
tcatggcgtgtgctggatggcgaccgtcaggtgacgcatccgcacccgtcattctctccg
gacgatcgtcacgtgctctttaccaccgattatgaaggcctgccggcgctgtatctggca
gaaattccggatgccctgctcagctcgttaagaaaggactaa
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