Rhizobium binae: J2J99_20935
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Entry
J2J99_20935 CDS
T07180
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rbq
Rhizobium binae
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbq03016
]
J2J99_20935 (thpR)
Enzymes [BR:
rbq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
J2J99_20935 (thpR)
Transfer RNA biogenesis [BR:
rbq03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
J2J99_20935 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QSY82062
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All DBs
Position
complement(4285686..4286279)
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AA seq
197 aa
AA seq
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MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDVDGRTADEIVERLDR
IDRPEFQFRLEGIGSFGSKKPHSVWAGVSQSPEMYALQGEIERICQRIGLPPDPRKFMPH
VTLARLKSSRLDDVVQYLAGRGNFHTATFTAPRFVLLSSRESVGGGPYLTEEVFPLHEAR
STPNASSRLLQPVKSLV
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactgtttaccgccctcgaaattccgcgcaatgcggcgatgagcctttcattg
ctgcgcggtggcctccccggagcacgatggatcgatgtggagaattaccacatcaccctg
cgcttcatcggtgatgtcgacggccgtacggccgatgaaatcgtcgaacgcctcgaccgg
atcgaccggccggaattccagttccggctcgaaggcatcggctccttcggctcgaagaaa
ccgcattcggtctgggccggcgtctcgcaatcaccggaaatgtacgccctgcagggtgag
atcgagcgtatctgccagcgcatcgggctgccgcccgacccgcgcaaattcatgccgcat
gtgacgctggcacggctcaaatcctcgcggcttgacgatgtcgtgcaatatctggccgga
cgcggcaacttccacaccgcaaccttcacggcgccacgcttcgtgctgctttcgtcgcgt
gaatcggttggcggcggaccctacctgacagaggaagtgttcccgctgcacgaggcacgt
tcgacgcccaacgcttcgagcaggctgctgcagccggtcaagagcctggtatag
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