KEGG   Rhizobium binae: J2J99_20935
Entry
J2J99_20935       CDS       T07180                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
rbq  Rhizobium binae
Brite
KEGG Orthology (KO) [BR:rbq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rbq03016]
    J2J99_20935 (thpR)
Enzymes [BR:rbq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     J2J99_20935 (thpR)
Transfer RNA biogenesis [BR:rbq03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    J2J99_20935 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: QSY82062
LinkDB
Position
complement(4285686..4286279)
AA seq 197 aa
MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDVDGRTADEIVERLDR
IDRPEFQFRLEGIGSFGSKKPHSVWAGVSQSPEMYALQGEIERICQRIGLPPDPRKFMPH
VTLARLKSSRLDDVVQYLAGRGNFHTATFTAPRFVLLSSRESVGGGPYLTEEVFPLHEAR
STPNASSRLLQPVKSLV
NT seq 594 nt   +upstreamnt  +downstreamnt
atgccgagactgtttaccgccctcgaaattccgcgcaatgcggcgatgagcctttcattg
ctgcgcggtggcctccccggagcacgatggatcgatgtggagaattaccacatcaccctg
cgcttcatcggtgatgtcgacggccgtacggccgatgaaatcgtcgaacgcctcgaccgg
atcgaccggccggaattccagttccggctcgaaggcatcggctccttcggctcgaagaaa
ccgcattcggtctgggccggcgtctcgcaatcaccggaaatgtacgccctgcagggtgag
atcgagcgtatctgccagcgcatcgggctgccgcccgacccgcgcaaattcatgccgcat
gtgacgctggcacggctcaaatcctcgcggcttgacgatgtcgtgcaatatctggccgga
cgcggcaacttccacaccgcaaccttcacggcgccacgcttcgtgctgctttcgtcgcgt
gaatcggttggcggcggaccctacctgacagaggaagtgttcccgctgcacgaggcacgt
tcgacgcccaacgcttcgagcaggctgctgcagccggtcaagagcctggtatag

DBGET integrated database retrieval system