Rhodococcus pyridinivorans TG9: CEJ39_19905
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Entry
CEJ39_19905 CDS
T05830
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEJ39_19905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rby03021
]
CEJ39_19905
03400 DNA repair and recombination proteins [BR:
rby03400
]
CEJ39_19905
Enzymes [BR:
rby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEJ39_19905
Transcription machinery [BR:
rby03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEJ39_19905
DNA repair and recombination proteins [BR:
rby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEJ39_19905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AWZ26130
LinkDB
All DBs
Position
complement(4274982..4278488)
Genome browser
AA seq
1168 aa
AA seq
DB search
MLEGRILAVSSQTKAVAGIPGAPTRVSFAKIREPLEVPGLLDLQTDSFEWLIGSERWRAK
AAERGDGHVVGGLEEILDELSPIEDFSGSMSLSFSDPRFDEVKASVEECKDKDMTYAAPL
FVTAEFINNNTGEIKSQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDKTVDK
STEKDLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWSTEQIVERFG
FSEIMMSTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKDKRYDLARVGR
YKINKKLGLNTGQPIEASTLTEEDIVATIEYLVRLHAGENKMTVPGGVEVPVEVDDIDHF
GNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGT
SQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPN
IGLIGSLSVYARVNPFGFIETPYRKVVDGVVTDEVEYLTADEEDRYLIAQANSPIGSDNR
FSDERVLVRKKGAEIEYVAADQVEYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQR
QAVPLVRSESPIVGTGMELRAAVDAGDVIVTEKSGVIEEVSADFITVMADDGTRKTYRLR
KFDRSNQGTCSNQRPIVDEGQRVESGQVLADGPCTENGEMALGKNLLVAIMPWEGHNYED
AIILSQRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIVRIG
AEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGENGKVIGVRVF
SREDDDDLPPGVNELVRVYVAQKRKIQDGDKLAGRHGNKGVIGKILPQEDMPFLPDGTPV
DIILNTHGVPRRMNIGQVLETHLGWIGKAGWQIQVADDGSRPEWAQNLSEEMLAAEPDTN
IATPVFDGAREEELTGLLSSTLPNRDGEVMVGPDGKATLFDGRSGEPFPYPVSVGYMYII
KLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTI
KSDDVVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIAMADGD
DEDLERAAANLGINLSRNESATVDDLAN
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacgcatcttggcagtctctagccagaccaaggcagtagccggaatcccc
ggagccccgacgagggtgtcgttcgcgaagattcgcgaacccctcgaagttcccgggctc
ctcgatctacagaccgattccttcgaatggttgatcggctcggagcgctggcgcgcgaag
gctgccgagcgcggcgacggtcacgtcgtcggtggcctggaggagatcctcgacgagctc
tcgccgatcgaggacttctcgggttcgatgtccctgtccttctccgatcctcgtttcgac
gaggtcaaggcctccgtcgaggagtgcaaggacaaggacatgacgtacgcggctccgctg
ttcgtcactgccgagttcatcaacaacaacaccggcgagatcaagagccagacggtcttc
atgggtgacttcccgatgatgaccgacaagggcaccttcatcatcaacggcaccgagcgt
gtcgtggtgtcccagctcgtccgttcgccgggcgtgtacttcgacaagaccgtcgacaag
agcaccgagaaggacctgcacagcgtcaaggtcatcccgggccgcggtgcctggctcgag
ttcgacgtcgacaagcgcgacaccgtcggtgtgcgtatcgaccgcaagcgccgtcagccg
gtcaccgtgctgctcaaggcgctgggctggtccaccgagcagatcgtcgagcgtttcgga
ttctccgagatcatgatgtcgacgctcgagaaggacaacacggcgggcaccgacgaggcg
ctcctcgacatctaccgcaagctccgtccgggcgagccgccgaccaaggagagcgcgcag
accctgctggagaacctcttcttcaaggacaagcgctacgacctggcgcgcgtgggccgt
tacaagatcaacaagaagctcggcctgaacacgggtcagccgatcgaggcgtccaccctc
accgaggaagacatcgtcgccacgatcgagtacctcgtgcgtctgcacgcgggcgagaac
aagatgaccgtccccggcggcgtcgaggttcccgtcgaggtcgacgacatcgaccacttc
ggcaaccgtcgtctgcgcacggtcggtgagctcatccagaaccagatccgcgtgggcctg
tcccgcatggagcgcgtggtccgtgagcgcatgaccacccaggacgtcgaggcgatcacg
ccgcagaccctgatcaacatccgtccggtcgtggctgcgatcaaggagttcttcggaacc
tcccagctgtcgcagttcatggaccagaacaacccgctgtcgggcctgacgcacaagcgt
cgtctgtcggcgctgggccccggcggtctgtcgcgtgagcgcgccggcctcgaggtccgc
gacgtccacccgtcgcactacggccgcatgtgcccgatcgagaccccggaaggcccgaac
atcggcctgatcggctcgctgtcggtgtacgcgcgggtcaacccgttcggcttcatcgag
acgccctaccgcaaggtcgtcgacggtgtcgtcaccgacgaggtcgagtacctcacggcc
gacgaggaggaccgctacctcatcgcgcaggccaactcgccgatcggctccgacaaccgc
ttctcggacgagcgtgtcctcgtccgtaagaagggcgcggagatcgagtacgtcgccgcc
gaccaggtcgagtacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgcgatg
atcccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgcagcgt
caggccgtgccgctggtgcgcagcgagtcgccgatcgtcggtaccggcatggagctgcgt
gccgccgtcgacgccggcgacgtcatcgtcaccgagaagagcggcgtgatcgaagaggtc
tccgccgacttcatcaccgtcatggccgacgacggaacccgcaagacctaccgtctgcgc
aagttcgaccgttcgaaccagggcacctgctcgaaccagcgtccgatcgtggacgaggga
cagcgcgtcgagtccggccaggtcctcgccgacggcccctgcaccgagaacggtgagatg
gcgctcggcaagaacctgctcgtggcgatcatgccgtgggagggccacaactacgaggac
gcgatcatcctgtcgcagcgcctcgtggaggaggacgtgctcacctcgatccacatcgag
gagcacgagatcgacgcccgcgacaccaagctcggtgccgaggagatcacccgcgacatc
ccgaacgtctccgacgaggtccttgccgacctcgacgagcgtggcatcgtccgcatcggt
gccgaggtccgcgacggcgacatcctcgtcggcaaggtcacgccgaagggcgagaccgag
ctgacccccgaggagcgcctgctccgcgcgatcttcggtgagaaggcgcgcgaggtccgc
gacacctcgctgaaggtgccccacggtgagaacggcaaggtcatcggtgttcgcgtgttc
tcgcgcgaggacgacgacgatctgcctccgggtgtcaacgagctcgtccgcgtatacgtg
gcgcagaagcgcaagatccaggacggcgacaagctcgccggccgccacggcaacaagggc
gtcatcggcaagatcctcccgcaggaggacatgccgttcctgcccgacggcaccccggtc
gacatcatcctgaacacccacggtgttccgcgtcgtatgaacatcggccaggtcctcgag
acgcacctgggctggatcggcaaggccggctggcagatccaggtggccgacgacggcagc
cgtcccgagtgggcacagaacctctccgaggagatgctcgccgccgagcccgacaccaac
atcgccacgccggtgttcgacggtgcccgcgaggaggagctgacgggtctgctgtcctcg
acgctgccgaaccgcgacggcgaggtcatggtcggccccgacggcaaggcgacgctgttc
gacggtcgctccggcgagccgttcccgtacccggtgtcggtcggctacatgtacatcatc
aagctgcaccacctggtcgacgacaagatccacgcgcgttcgaccggtccgtactcgatg
atcacgcagcagccgctcggtggtaaggcgcagttcggtggtcagcgcttcggtgagatg
gagtgctgggcgatgcaggcctacggcgccgcctacaccctccaggagctgctcacgatc
aagtccgacgacgtcgtcggtcgcgtcaaggtctacgaggcgatcgtcaagggcgagaac
atccccgagccgggtatccccgagtcgttcaaggtgctcctcaaggaactccagtcgctg
tgcctgaacgtggaggtcctctccagcgacggcgcggccatcgcgatggccgacggcgac
gacgaggacctcgagcgggcggccgccaacctgggcatcaacctttcccgcaacgagtcg
gccacggtcgacgacctcgcgaactag
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