Rhodococcus pyridinivorans TG9: CEJ39_20965
Help
Entry
CEJ39_20965 CDS
T05830
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CEJ39_20965 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rby03400
]
CEJ39_20965 (xth)
Enzymes [BR:
rby01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CEJ39_20965 (xth)
DNA repair and recombination proteins [BR:
rby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CEJ39_20965 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AWZ26324
LinkDB
All DBs
Position
4477022..4477825
Genome browser
AA seq
267 aa
AA seq
DB search
MRLATWNVNSVRARTDRILDWLQRTDTDVLAMQETKCKDEQFPYERFEELGYRVAHVGLS
QWNGVAIASRVGLDDVQIGFEDQPGFSKDPEVDPALEARAIGATCAGVRVWSLYVPNGRD
LNDPHYTYKLDWLAKLRADAHAWATAAPGQPIALVGDWNVAPTDDDVWDPAFFEGKTHTS
QPERDAFHAFADVGYTDVVRPYAPGPGVYTYWDYTQLRFPKKQGMRIDFVLGSPAFAARV
TDAEIDRNERKGKGASDHAPVVVDLDL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccttgctacctggaatgtgaactccgtccgtgcccgtaccgaccgcatcctcgac
tggttgcagcgaaccgacacggatgtgctcgcgatgcaggaaaccaagtgcaaggacgag
cagttcccgtacgaacgcttcgaggaactcggctaccgcgtcgcgcacgtcggactgagc
cagtggaacggtgtggccatcgcgtcgcgcgtgggcctcgacgacgtgcagatcggcttc
gaggaccagcccggtttctccaaggacccggaggtcgatccggcgctcgaggcgcgggcg
atcggggcgacgtgcgcgggtgtgcgcgtgtggagcctgtacgtccccaacggccgcgac
ctcaacgacccgcattacacctacaagctcgactggctcgccaagctgcgcgccgacgcg
cacgcctgggccaccgcagcgcccgggcagcccatcgcgctggtcggcgactggaacgtc
gcccccaccgacgacgacgtgtgggatccggccttcttcgagggcaagacgcacacttcg
cagcccgagcgcgacgccttccacgcgttcgccgacgtcggctacaccgacgtcgtccgt
ccgtacgcgcccggccccggggtctacacctactgggactacacccagctgcgcttcccc
aagaagcagggcatgcggatcgacttcgtcctcggatcaccggccttcgcggcacgggtg
acggacgccgagatcgaccgcaacgaacgcaagggcaagggcgcgagcgaccacgcaccg
gtcgtcgtcgacctcgacctctga
DBGET
integrated database retrieval system
