Aestuarium zhoushanense: B9057_03320
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Entry
B9057_03320 CDS
T05514
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rbz
Aestuarium zhoushanense
Pathway
rbz03410
Base excision repair
rbz03430
Mismatch repair
rbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B9057_03320
03430 Mismatch repair
B9057_03320
03440 Homologous recombination
B9057_03320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbz03400
]
B9057_03320
DNA repair and recombination proteins [BR:
rbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B9057_03320
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B9057_03320
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B9057_03320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
DUF4600
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
AUJ63406
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Position
complement(654687..656435)
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AA seq
582 aa
AA seq
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MKAFLNVEQSATGRRWIGPSIQEDRLAEAMEQATGLPAPVCRTLARRGVEPHEADSFLAP
TLRDLLPDPLTLLDMEKASERFIAALDRREKIAVFADYDVDGGTSAALLLTWLKAMGHRA
TLYIPDRIDEGYGPNEPAMEALAKDHDLIICVDCGTLSHGPIAAAKGADVMVLDHHLGAE
TLPDCVAVVNPNRQDETGELAHLCAAGVVFMMLVDVNRRLRAKGITGPNLMSFLDLVALA
TVADVAPLIGVNRAFVRQGLAVMAQRDRIGLTALADVAGMDSAPTSYHLGFLLGPRVNAG
GRIGAADLGARLLATDDPREAESLAKQLDQLNRERREIENEVRDLALLQAEERGFDSPLV
WAAGEGWHPGVVGIVASRLKEATNRPSIVIGFDGDIGKGSGRSVTGIDLGASIQKLAMEG
LLIKGGGHKMAAGLTVHRDKLDAAMERLAELMARQGADRLGPADLRLDGILMPGAATVEL
VEQIEKAGPFGASASAPRFVFPDVQIHFAKRVGANHLKATFGDGLGARIDAIAFGAFDGP
IGPMIEAHNGARFHLAGRLEINIWQGRQSVQLRLEDAAPAGK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcatttctcaacgtcgaacagtccgcaacgggtcgccgctggattggccccagc
atccaagaagaccgccttgccgaagcgatggaacaggcgacaggcctgcccgctccggtt
tgtcggacattggcgcgccgtggcgttgaaccgcatgaagctgacagttttctggcgccg
acgttgcgcgatcttctccccgatccgctgaccttgctcgacatggaaaaggcgtccgaa
cgctttatcgctgcgctcgaccgccgagaaaagattgccgtttttgctgattacgacgtg
gatggcggcacctctgccgcgctccttctgacgtggttaaaggctatgggacaccgagcg
acgctctatattcccgaccgcattgatgagggctatggcccaaatgagcccgcgatggaa
gcgctcgccaaggatcacgacctgatcatttgcgttgactgcggcaccctctcgcatggt
ccaattgccgccgcaaagggcgcggatgtgatggtcctcgaccaccacttgggcgcggaa
accctgcccgactgtgtcgccgtcgtgaaccccaaccgccaagatgaaacgggcgaactg
gcgcatctctgtgctgcgggtgtcgtgttcatgatgcttgtcgatgtaaaccgccgcctg
cgggcaaagggcattacagggccgaacctgatgtcattcctagacctcgtcgcattggcg
acggttgcggacgtggccccgctgatcggcgtgaaccgtgcgtttgttcgtcaaggcctc
gccgttatggcgcaacgcgatcgcatcggcctaacagcattggcggatgtcgctggtatg
gacagcgcaccgacgtcctatcacctcggttttctccttggccctcgcgtcaacgcgggc
ggtcgcattggcgctgctgatctgggcgcgcgccttttggcgacagatgacccgcgtgag
gcggaaagccttgccaaacaactggaccagctgaaccgagaacgccgcgaaatcgaaaac
gaagtgcgtgatctggcgctgttgcaggccgaagagcgagggtttgatagccctctggtt
tgggccgcgggcgaaggctggcatccgggcgtcgtcggcatcgtggcaagccgtctcaaa
gaagccaccaaccgcccgtccatcgtgattggttttgacggcgacattggcaaaggttct
ggccgttcggtgacgggtatcgacctcggtgcgtcgatccaaaagcttgccatggaaggg
ctactgatcaagggcggcggccacaaaatggcggcgggcctgacggtgcatcgggataaa
ctcgatgctgcgatggaacggctggccgaacttatggcgcgccaaggtgctgatcgcttg
ggacccgctgacctacggctcgatggcatcctcatgcccggtgctgccacggttgaattg
gttgaacagatcgaaaaggctggaccgttcggcgcatcggcctctgcccctcggttcgtt
ttcccggacgtgcaaatccatttcgcgaaacgagtcggcgcaaatcacctaaaggccaca
ttcggcgacgggcttggcgcacgaatcgatgcgattgcctttggcgcgtttgatggcccg
atcggaccgatgatcgaggcccacaacggcgcgcggttccaccttgctgggcggttagaa
atcaatatttggcaaggcagacagagcgttcagctccgtctcgaagacgctgcacccgct
gggaaataa
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