Roseiflexus castenholzii: Rcas_3472
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Entry
Rcas_3472 CDS
T00585
Name
(GenBank) 3-isopropylmalate dehydratase, small subunit
KO
K16793
methanogen homoaconitase small subunit [EC:
4.2.1.114
]
Organism
rca
Roseiflexus castenholzii
Pathway
rca00300
Lysine biosynthesis
rca00680
Methane metabolism
rca01100
Metabolic pathways
rca01110
Biosynthesis of secondary metabolites
rca01120
Microbial metabolism in diverse environments
rca01210
2-Oxocarboxylic acid metabolism
rca01230
Biosynthesis of amino acids
rca01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Rcas_3472
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rcas_3472
Enzymes [BR:
rca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
Rcas_3472
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Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ABU59522
UniProt:
A7NPM6
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All DBs
Position
complement(4532388..4532888)
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AA seq
166 aa
AA seq
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MARIWRFGANINTDQIVPGRYAPYMLKNEDELRNYPFIEARPEFASTVRPGDLIIAGPNF
GCGSSREYAPLALKMVGIGAIIAPLFARIFYRNALNLGIPLFEADLTDQLEDGQEVEFNA
ETGVIVADGRAIQLPPPPEWMREVWREGGIVPFYRKHRRFPGVVPV
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtatctggcgttttggcgcaaatatcaataccgatcagatcgtccctgggcgc
tatgcgccgtatatgctcaagaatgaggacgaattgcgcaactatccgttcattgaggcg
cgtcccgagtttgcttcaaccgtgcgccctggcgacctgatcatcgccggtccaaacttc
gggtgcggttcgtcgcgcgaatatgcgccgctggcgctcaagatggtcggcatcggtgcg
atcatcgcgccgctcttcgcgcgcattttctaccgcaacgcgctcaacctgggtattccg
ctgttcgaggcggacctgaccgatcaactggaagacgggcaggaagtggagttcaacgcc
gaaaccggcgtcatcgtcgccgacggtcgcgcaattcaactgccgccgccacccgaatgg
atgcgtgaggtctggcgcgaaggcgggattgtgccgttctaccgcaagcatcgccgcttc
cccggagtagtgcccgtatga
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