Roseiflexus castenholzii: Rcas_3858
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Entry
Rcas_3858 CDS
T00585
Name
(GenBank) anti-sigma-factor antagonist
KO
K17763
rsbT co-antagonist protein RsbR
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rca03021
]
Rcas_3858
Transcription machinery [BR:
rca03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Rcas_3858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
STAS
STAS_2
DUF4337
Viral_env_HRPV
Glyco_hydro_38
DUF8066
Motif
Other DBs
NCBI-ProteinID:
ABU59895
UniProt:
A7NQP9
LinkDB
All DBs
Position
complement(5041587..5042660)
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AA seq
357 aa
AA seq
DB search
MSYSYLQTGDPGDLEEGAELLERLQRMVAQLRTSDHIYGDFQEEVAEQHIPVVDQGRALL
QAVQDLHHRLSFGIDTPTDAQREAFYQEIERIEEQRETFTKQANAHLAGIRTVAQQHIEG
DVRLTFVGIAIALAAMVALTIGVLWLIERHIVRPLRSITNAASRLAEGRLDGELAITSND
EIGVLQQTFNRMAATIRRQTGDLEIHYRQVTQARDALEAAHRQAVEQLAIIQRQQEAIRK
LSVPVLPVSRDTPVMPLVGALDSARLIQVQEQALERLAATRARRLLLDITGVPIVDSHVA
QGLIRVVQAAHLLGAEVMLIGIRPEVAQSIVGLGISLSNIRTCSDLQSALAQKGGRL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgagttactcatatctgcaaaccggcgatcctggagatcttgaggagggcgccgaactg
cttgagcgcctgcaaaggatggtggctcagctgcgcacgtcggaccatatctacggcgat
ttccaggaagaagtcgccgagcagcacataccggttgtggatcagggcagggcgcttctg
caagcagtacaggacctgcaccatcggctgtcgttcgggatcgatacgccgaccgatgca
cagcgtgaagcgttttatcaggagatcgaacgaatcgaagagcagcgtgagacattcacg
aaacaagcgaatgcgcatcttgcaggcatccgcactgttgcgcagcagcatattgaaggc
gatgtcaggctcaccttcgttggcatcgccattgcactggcagcgatggtcgcattgacc
ataggcgtgctctggttgattgagcgacatattgtgcgtccgctacgctcgatcaccaac
gcggcaagccgccttgcggagggacgtctggatggcgagttggcaattacgagcaacgac
gagatcggcgtgctgcaacagacgttcaaccgcatggcagcgacgatccggcggcaaacc
ggcgatcttgaaatacactaccggcaggtgacacaggcgcgtgacgcgctcgaagcggca
cacaggcaggcggtcgaacaactggcgattattcagcggcagcaggaagccattcgcaaa
ctgagcgttccggtgctgccggtgagccgtgataccccggtgatgccgctggtcggcgcg
ctcgacagcgcccgcctgatccaggtgcaggagcaggcgctggaacggcttgcagcaacc
cgcgctcgtcgcctgttgctcgacatcaccggtgtgccgattgtagacagtcatgtggcg
caggggctgattcgcgtcgttcaggcggcgcatcttctcggtgcagaggtgatgttgatc
ggcattcgtcctgaagtggcgcagtccattgttggtttaggcatcagcctgagcaatatt
cgaacctgtagcgatttgcagagcgcactggcgcaaaaaggaggacgcttgtga
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