Rickettsia canadensis CA410: RCA_01850
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Entry
RCA_01850 CDS
T01736
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rcc
Rickettsia canadensis CA410
Brite
KEGG Orthology (KO) [BR:
rcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcc03032
]
RCA_01850 (gyrB)
03400 DNA repair and recombination proteins [BR:
rcc03400
]
RCA_01850 (gyrB)
Enzymes [BR:
rcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RCA_01850 (gyrB)
DNA replication proteins [BR:
rcc03032
]
Prokaryotic type
DNA Topoisomerases
RCA_01850 (gyrB)
DNA repair and recombination proteins [BR:
rcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RCA_01850 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFB20945
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All DBs
Position
433761..436187
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AA seq
808 aa
AA seq
DB search
MSEIEENFNKSSYGADSIKVLKGLEAVRKRPGMYIGDVGNGSGLHHMIYEVVDNAIDESL
AGYCDLVQVILNKNGSVTVSDNGRGIPVEIHEEEGISAAEVIMTQLHAGGKFDQNSYKVS
GGLHGVGVSVVNALSEWLELRIWRNNKEYLIRFNNGITEAPLAVVKENIDKKGTEVTFFP
SVETFTNIEFDFGTIEHRLRELAFLNSGVKILLVDNRFEEAKEAEFYYTGGIEAYVKYID
RAKHAIHPCIIVNVDNAESGINLELAMHWNDSYYENILCFTNNIRQRDGGTHLSAFKSAI
TRVITSYLDTTGLNKKVKNDFSGEDTREGLCCVLSVKVPDPKFSSQTKDKLVSSEVRPVV
ENIVYTKVLEWFEEHPAEARAIIAKIMEAANAREAARKAREFTRRKSALEISNLPGKLAD
CHAKDPAISELFIVEGDSAGGTAKQGRDSKIQAILPLRGKILNVERARFDKMLGSDQIGT
LITALGTGVDNQEFSLEKLRYHKVIIMTDADVDGSHIRTLLLTFFYRNMPELINKGYLYI
AQPPLYKVKKGAAEFYLKNEQALQDYLIKSTINDATLILDGKEQLVDGNLEELINTVVKF
NACLDHASKKFNRSITEILAINDLLNNKIFDAESDLRCKKALDVLNSLEESPDKTNWEVL
KHENKIEFFRFNRGLKESKILLKEQLESFEFVQISKLALTIFDIFCKQLKLIVKSQECDI
LTPSQLLNTIIACGKKGINIQRFKGLGEMNSNQLWETTLDPEKRTLLQVRVAEVDEAEGI
FSTLMGDVVEPRRLFIQANALNVVNLDV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaattgaagaaaattttaacaaatcatcatatggtgctgattctataaaggtt
ttaaaaggtcttgaagctgtaagaaaaagaccaggaatgtatatcggggatgttggaaat
ggatcgggtctacatcatatgatttatgaagtagtcgacaacgctatcgacgagtcgctc
gccggttattgtgatttagtccaggtaatattaaataaaaacggttcagtaaccgtgtcc
gataacgggcgaggtataccagtcgaaattcatgaagaggaaggaatatcggcagctgaa
gttattatgacacagcttcatgccggtggtaagtttgatcagaactcctataaagtttca
ggtggtctacacggtgtcggtgtatcggtggtaaatgctctttctgagtggcttgagctg
cgtatatggcgtaataataaggagtatttaattagatttaataacggtataacggaagct
ccgcttgcggttgtcaaagaaaatattgataaaaaaggtacagaagttacttttttcccg
tctgtagaaacatttactaatatagaatttgatttcggcactatagagcatcgtcttcgt
gagcttgcttttttaaattcaggcgtaaaaattttattagtagataatcgcttcgaagaa
gctaaggaagcagagttttattatacaggtggtatagaagcttatgtgaaatatatagat
agagcgaagcacgctatccacccatgtataatagtcaatgtagataatgctgagtccggt
ataaaccttgagcttgcaatgcactggaatgattcgtattatgaaaatattttatgcttt
actaataatattaggcagcgtgacggcggaacccaccttagtgcttttaaatcagctata
acacgtgttattacttcttatcttgatactacgggtcttaataaaaaagttaaaaatgac
tttagtggtgaagatactagggaagggttatgttgtgtgctttctgttaaagtgcccgat
cctaaattttcctctcagacaaaagacaaactagttagttctgaggtaagacctgttgtt
gaaaatattgtttatacaaaggttcttgagtggtttgaagagcatccggcagaagcaagg
gcaattatagctaagattatggaagcggcgaatgctcgtgaagctgctagaaaagcaagg
gagttcactagaagaaaatcagctttagagatctcgaacttacctggtaaacttgcagat
tgccatgcaaaagatcctgcaatttcagaattgtttatagtagagggtgattcggcgggt
ggtactgcaaagcagggtagggacagtaagattcaggctatattacctctgcgtggtaaa
attttaaatgttgagcgagcaagatttgataaaatgcttggttctgatcaaatcggtacg
ttaattacggctcttggaaccggtgttgataaccaagaattttctcttgaaaagcttaga
taccataaagttattattatgaccgatgccgacgttgatggctcgcatattagaacttta
ttgctcacgtttttctatcgtaatatgccggagctaataaataaagggtatctatatata
gcccagcccccactttataaggtaaaaaaaggagcagccgagttttatttaaagaatgag
caagctttgcaagattatttgataaaatcaactatcaatgatgcaaccttaattctagac
ggtaaagagcagttagtagatggtaatttagaagagctcattaatacagtagttaagttt
aacgcgtgtcttgatcatgctagcaaaaaatttaatcgttcaattactgaaattcttgcg
attaatgacttacttaataacaaaatatttgatgctgaaagtgatttaaggtgtaaaaaa
gctttagatgttttaaatagcttagaagagtcgcctgataaaactaattgggaagtttta
aaacatgaaaataaaatagagtttttccgttttaacagaggtttaaaagaaagtaaaata
ttgttgaaagagcagttggaatcatttgagtttgtacaaatatcaaaacttgctttaacg
atttttgatatattttgtaagcaattaaagcttatagtgaaaagtcaggaatgtgatatt
ttaacaccaagtcagttgttaaataccattatagcatgtggaaaaaaaggtataaatatt
cagcgttttaaaggtctcggtgagatgaattctaatcagctatgggaaactactcttgac
cccgaaaaaagaactttgcttcaggtcagagttgcagaagtcgatgaagcagagggcatt
ttctctactttaatgggtgatgttgtcgaacctcgtagattatttatccaagcaaatgct
ttgaatgttgtgaatttagatgtgtag
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