Ruminococcus champanellensis: RUM_24010
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Entry
RUM_24010 CDS
T02600
Name
(GenBank) Cellulose binding domain./Glycosyl hydrolase family 9.
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00500
Starch and sucrose metabolism
rch01100
Metabolic pathways
rch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RUM_24010
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RUM_24010
Enzymes [BR:
rch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
RUM_24010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
Dockerin_1
CBM_3
Motif
Other DBs
NCBI-ProteinID:
CBL18389
UniProt:
D4LFJ4
LinkDB
All DBs
Position
complement(2552729..2554930)
Genome browser
AA seq
733 aa
AA seq
DB search
MNKRIISLACTGAILAGAAGSLPVQNAGLHGAAADINYATALQMSLYFYECQQAGHLPAW
NRVEWRADATTDDFIDGGWYDAGDHVKFNLPMAYSASMLAWGLYQYGDGVQACGEMENYV
NNLSFVLDYLAACDLGDEIVFQVGNGQEDHTWWGPVELYSYGMGESSPYTRPYYKASEGC
SAVFGEMAAALAAGYCALDGKIGEGQRSAYLEHAENIFKIASTSPSDTVYNDSDASGFYR
SSHFYDELFYAANWLYKATGDKAYLNKAESYIPNLGKELGTSELKYSWSQCWDDVQQGGL
LLYAQNTKDSTYISRVQKHLDYWCSGKQLDGGLCYVDTWGCLRYANNIGFLAAVACDTLF
SSDAALCTKYKTLYENQINYSLGDNPDHQCYVVGHCANSPKNPHHRTAHCSWKNALETPE
TNRHVLYGALVGGPDNSGNYEDDRGNYINNEVATDYNAGFTALLCKMVSAYGGETDAAFP
EPEVRTPEFFVEAKATSDAGGVNLSLKFTNQTAWPARVEDNLSYRYYMDLSEVIAAGNKP
EDVVIRCDRDQSAMYSDVTPAQISGIQHYSGDIYYVEVTYPDGRAAIPISEGRYQCETML
ALVFPNYGKGWDSTNDYSCQDIEGAEDNVMTDKITVYQNGVLLYGIEPDGTAPVTTAAST
SGGTTGTTTGTETALPGDANADGKVQIADVVTLNKYLVGAGKLTARGAKNADMDDNGRLD
AVDAVLLKRIFVS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcgcatcatcagtcttgcctgcacgggggcgatccttgcaggggcggcaggc
agtctgccggtacagaacgccggtctgcatggggcagcggcggacatcaactacgccacc
gctctgcaaatgtccctgtatttttacgagtgccagcaggcagggcatctgccggcgtgg
aaccgggtggaatggcgtgcggacgctaccaccgatgattttattgacggtggctggtac
gatgccggcgatcatgtgaaattcaatctgcccatggcgtattctgcgtccatgctggcg
tgggggctgtaccagtatggggacggcgttcaggcatgcggcgagatggagaactacgtc
aacaacctgagctttgtgctggattacctggcggcatgcgacctgggggacgagatcgtg
ttccaggtgggcaacggccaggaggatcatacctggtggggaccggtggagctgtattcc
tatggcatgggggagagcagcccctacacccgtccgtattataaggcatccgagggctgc
tccgccgtattcggagaaatggcggctgccctggcggcagggtactgcgccctggacgga
aaaatcggggaaggtcagcggagtgcctacctggagcatgcggaaaacatcttcaagatc
gcttccacaagccccagcgatacggtatacaacgacagtgacgccagcggcttctaccgc
tccagccacttctacgacgagctgttctatgcggcaaactggctgtacaaggcaaccggc
gacaaggcatacctgaacaaggcggaaagctatatccccaatctggggaaggagctgggc
acctccgagctgaaatactcctggtcccagtgctgggatgatgtgcagcagggcggcttg
ctgctgtatgcccagaacaccaaggattccacctacatctcccgggtgcagaagcacctg
gattactggtgcagcggcaagcagctggacggtggcctgtgctatgtggacacctggggc
tgcctgcggtatgccaacaacatcgggttcctggcggcggttgcatgcgacaccctgttc
agctctgatgcggcactgtgcaccaagtacaagaccctgtacgagaatcagatcaactac
tctctgggggataacccggatcaccagtgctatgtggtaggccactgtgcaaattccccc
aagaacccccatcaccggacagcccactgctcctggaagaatgccctggaaacaccggaa
accaaccggcatgtgctgtacggcgcactggtaggcggcccggacaacagcggcaactac
gaggacgatcgtgggaactacatcaacaacgaggttgccaccgactataacgctggcttt
accgcactgctgtgcaagatggtcagcgcatacggaggcgagaccgacgctgcattcccg
gagccggaagtccgcacgcccgaatttttcgtggaggcaaaggcaaccagtgacgcaggg
ggcgtgaacctgagcctgaaattcaccaaccagaccgcatggcctgcacgggtggaggac
aatctgtcctatcggtattatatggatctgtccgaggtcattgcagccggcaacaagccg
gaggatgtggtaatccgctgcgaccgggatcagagcgccatgtacagcgacgtgaccccg
gcgcagatcagcggcattcagcattacagcggagacatctactatgtggaggtcacctac
ccggacggcagagcagccatcccgatctccgagggcagatatcagtgcgagaccatgctg
gcgctggtattccccaactacggtaagggctgggattccaccaacgactactcctgccag
gacattgaaggggcggaggacaacgtgatgaccgacaagatcaccgtgtaccagaacggg
gtgctgctctacggcatcgagccggacggcactgctccggtgactacggctgccagcacc
tccggcggcaccaccggcaccaccaccggcacggaaactgcactgcccggagacgccaat
gcggacggcaaggtgcagatcgcagacgtggtgacgttgaacaaatacctggtgggagca
gggaagctgaccgcccggggcgccaagaatgcggatatggacgacaacggcagactggac
gcagtggatgcggttctgcttaaacgaatctttgtttcttaa
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