Methanocella arvoryzae: LRC5
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Entry
LRC5 CDS
T00526
Symbol
mutSb
Name
(GenBank) putative DNA mismatch repair protein, N-terminal fragment
KO
K07456
DNA mismatch repair protein MutS2
Organism
rci
Methanocella arvoryzae
Pathway
rci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LRC5 (mutSb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rci03400
]
LRC5 (mutSb)
DNA repair and recombination proteins [BR:
rci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LRC5 (mutSb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_5
MutS_V
5_3_exonuc
HHH_2
HHH_3
Rad17
tRNA_bind_2
AAA_29
T2SSE
Motif
Other DBs
NCBI-ProteinID:
CAJ38224
UniProt:
Q0W069
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Position
complement(45568..47265)
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AA seq
565 aa
AA seq
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MHVSELTGYPGIGEKIAAKLVEHFGSEEQALEILNRRDVASLAEVPGISEKYAVSIIHQI
IAHQDGVSIDDFLQTPEAMNVYERVIGLIRSYSHTQYSRSRISTYIPFPSAKADKIKATQ
ALLKDYVALAGKLSREAALDSSLKKIRYLKRPANVQKSRDRAVFVDNKKDYEKILSLQID
RYMEVNMVSSPGELVDLARGYAQVLVVGSKLTGADYPEDLSLEFADNPGDLWWLVPEITI
SYFAVNKEPIEAAIESIRLIRSKSDFPICQYADDAKLSELSTELANISPDGELALGVDQE
LDRLKDILKRFNEVLQATLKKANADLSERMEKNTVTLKGSQLLNMFGSNTESLKSMLEKE
VAKNYAEVVAEAKESMKNELQLKPFEMQHVDLIFKDEIVYPIEINYRGTESFRNAINRQL
IKRSLDMKRASAKRLAKYESVCKDMIRDVLEFDTYYAIGLFSADYALRMPKMTKKAGVTI
TGGRNIFIGAQKAEPVSYAVGTKTPETKGERIVLLSGVNSGGKTTMLDMLAQIIVLSHMG
FPVPADSAEIGLTDQLLTSANPKEP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgagcgaactgacagggtacccggggattggggaaaagatagctgcaaagctt
gtcgagcatttcggctctgaagagcaggcgctggagatcctgaacaggcgggacgtagcc
agcctggcagaagttcctggcatcagcgaaaagtatgcggtctcgatcatccaccagatt
atcgcccaccaggacggcgtatcgatcgatgatttcctgcagaccccggaagcgatgaac
gtctacgagcgggtcatcggcctaatcaggtcttactcccatactcagtattcacgctcg
agaatcagcacctacatcccctttccgtcggctaaagccgataagatcaaggctactcag
gctttactgaaagactacgtcgcactggcgggcaaactctccagagaagcagccctggac
agctcgctgaagaagatcaggtacctgaagaggccggccaacgtccagaagtctagagac
agggccgtctttgtcgataataagaaggactacgagaaaattctgagcctgcagattgac
cggtacatggaagtaaacatggtgtccagccctggagagcttgttgatcttgcccggggc
tacgcccaggtgctggtcgtggggagcaagctgaccggcgcagactacccggaagatctc
agcttagagttcgcggacaaccccggggacctgtggtggctggtgccggagatcactatc
agctacttcgcggtcaacaaggaacccattgaagcggcaatagaatcgatcaggctgatc
aggagcaaatcggacttccccatatgccagtatgctgacgatgcgaagctctcggaactc
tcgacagagctcgccaacatcagtcccgacggcgagctcgcgctgggcgtcgatcaggag
ctcgaccggctgaaggacatcctgaagcggttcaacgaggttctgcaggcgacgctgaaa
aaggcaaatgcagacctgagcgagcgaatggagaagaacacggtcaccctcaagggctcc
cagctcctgaacatgttcggcagcaataccgagagcctgaagagcatgctcgaaaaggaa
gtggccaagaattacgcagaagtcgtggctgaagctaaggaaagcatgaagaacgagctt
cagctcaagcccttcgagatgcagcacgtcgacctcatttttaaggacgagatcgtctat
ccgatcgagatcaactaccggggaaccgaaagcttcaggaacgccataaacaggcaactg
atcaagcgcagcctcgacatgaagagggcgagcgcaaagcgcctcgctaagtatgagtcg
gtctgcaaagacatgatccgggacgtccttgagttcgacacctattacgcgatcggatta
ttctccgccgactatgcgctcaggatgccgaagatgacgaagaaggcgggtgtcacaatc
actggcggccggaacatcttcatcggggcgcagaaggctgaaccggtctcctacgcagtc
ggaacgaagacgcccgagaccaaaggcgagcgcattgtgctgttaagcggcgtaaactcg
ggcggtaagactaccatgctcgacatgctcgcccagatcatcgtgctgtcccacatgggc
ttcccggtgcctgccgactccgctgagatagggctgactgatcagctgctcacttcagca
aatccaaaggaaccctga
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