Methanocella arvoryzae: LRC553
Help
Entry
LRC553 CDS
T00526
Symbol
rfbB-2
Name
(GenBank) putative dTDP-glucose 4-6-dehydratase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
rci
Methanocella arvoryzae
Pathway
rci00520
Amino sugar and nucleotide sugar metabolism
rci00521
Streptomycin biosynthesis
rci00523
Polyketide sugar unit biosynthesis
rci00525
Acarbose and validamycin biosynthesis
rci01100
Metabolic pathways
rci01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
LRC553 (rfbB-2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LRC553 (rfbB-2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LRC553 (rfbB-2)
00525 Acarbose and validamycin biosynthesis
LRC553 (rfbB-2)
Enzymes [BR:
rci01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
LRC553 (rfbB-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
CAJ35487
UniProt:
Q0W806
LinkDB
All DBs
Position
2751370..2752326
Genome browser
AA seq
318 aa
AA seq
DB search
MTVTSLVTGGSGFIGSHLCEYLLGKGENVIAVDNLGSGRLENIGGVMGNDRFRFIRHDIR
EPLQIDGKIDFVYNLASRASPVDFFTQAEEILMTNSLGTYNMIQLALEKKARFLEASTSE
SYGDPTISPQPETYWGNVNPIGPRGCYDEAKRFSEALTMAFVRYHGLDGRIIRIFNTYGP
RMRPDDGRVVPNFTMQALAGEPMTVYGEGSQTRSFCYVSDLVRGIYLAMNRDVRGEVINL
GNPTEMTVLEFAKKIKAITGSSSEIVFRPLPENDPMQRRPDIGKAKRLLGWEPEVGLDEG
LQLTIEWFRQSLNCPKPA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgacatcgctggttacgggtggctcgggcttcatcggctctcacctctgcgaa
tacctgctcgggaaaggcgagaacgtcatagcagtcgacaacctcggcagcgggcgcctc
gaaaatataggcggggtcatgggcaacgatcggttcaggttcatccggcatgacatccgg
gagcccttgcagatcgacggcaagatcgattttgtgtacaacctggcctcgagggcgtct
ccggtggacttcttcacccaggcggaagagatcctgatgaccaacagcctcggcacgtac
aatatgatccagctggccctggaaaagaaagcccggttcctggaagcctcgacatcggag
agctacggcgatccgactatcagcccccagcctgagacctactggggtaacgtcaacccg
atcggtccccggggctgctatgatgaagccaagcggttttccgaagcgctcaccatggcc
ttcgtcaggtaccacgggctcgatggcaggatcatccggatcttcaacacttacggcccg
agaatgcgcccggatgacgggcgggtggtgccgaacttcaccatgcaggcgctggccggg
gagccgatgactgtttacggtgaaggcagccagacccgcagcttctgctatgtgtcggac
ctggttcgggggatatacctcgcgatgaaccgggatgtcaggggcgaggttatcaacctc
ggcaaccccacggagatgactgtgctggagttcgcgaagaagatcaaggccataactggc
agcagcagcgagatcgtgttcaggccgctgccagagaacgatcccatgcagcgcagacct
gatattggaaaggcgaagaggctgctggggtgggagccggaagtcgggctcgacgaagga
ttgcagctgacgatcgagtggttccggcagagcctgaattgtccgaagccagcttga
DBGET
integrated database retrieval system
