Methanocella arvoryzae: RCIX567
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Entry
RCIX567 CDS
T00526
Symbol
erf1
Name
(GenBank) translation termination factor
KO
K03265
peptide chain release factor subunit 1
Organism
rci
Methanocella arvoryzae
Pathway
rci03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
RCIX567 (erf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rci03019
]
RCIX567 (erf1)
03012 Translation factors [BR:
rci03012
]
RCIX567 (erf1)
Messenger RNA biogenesis [BR:
rci03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
RCIX567 (erf1)
Translation factors [BR:
rci03012
]
Eukaryotic type
Release factors
RCIX567 (erf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Clr5
zf-DNL
Motif
Other DBs
NCBI-ProteinID:
CAJ35975
UniProt:
Q0W6L8
LinkDB
All DBs
Position
complement(2240784..2242037)
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AA seq
417 aa
AA seq
DB search
MSSEDQRHKYEFKRKLEELRNKQGQGTELISLYIPHDKRISDVVAYLRDEHGSAANIKSK
STRDNVQSALESIMAKLKYFKEPPENGMVIFTGAVSLGGNKESMESIVVEPPQPITSYSY
RCGSNFELEKLEEMLVDKKTFGLIVIDRREATIGTLKGKHITPLRHLTSTVPGKQRKGGQ
SSHRFQQLRLIAINEFNKRVGDAANDIFLAIDRKDFQGILIGGPTPTKEEFVKGEYLHHE
LQPKILGLYDVAYTDESGLTELMDAATDTLSNLDVVKEKKLLEKFMKELIAERGLAAYGE
DSVRTNLQMGAVEVLLLSEDLRKSRLTIKCQSGSCDYTTTKSIKYRVGETPTVGERCPKC
QSSLTISENIDIVEELSLIAEQMNTEVEFVSTDFEEGEQLYNAFGGIAAILRYHTGS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgaagaccaaagacacaagtatgaatttaagaggaagctcgaagagcttcgg
aataagcagggccagggcacagagctcatttcgctctacatcccgcacgataagaggatc
tccgatgtagtcgcctatctcagggatgagcacggttcggcagccaacatcaagtccaaa
tccacccgggacaacgtgcagagcgcgctggagtcgatcatggccaagctcaagtatttc
aaggagcctcccgagaatgggatggtcatctttaccggcgctgtgtcgctgggcggcaac
aaggagtccatggagtccatcgtcgtcgagccgccccagcctatcacctcgtactcttac
cggtgcggcagcaacttcgagctggagaagctcgaggaaatgctggtggacaagaagacc
ttcggcctgatcgtcatcgaccgcagggaggccaccatcggcaccctgaagggcaagcat
attactccgctgcggcacctgacaagtactgtgccgggcaagcagaggaagggtggccag
tcgtctcaccgtttccagcagctccgtctcatcgccatcaacgagttcaacaagcgtgtc
ggtgacgcggccaacgatattttcctcgccatcgacaggaaagatttccagggcatccta
atcggcggccccactccgaccaaggaagagttcgtgaagggcgagtacctgcaccatgaa
ctgcagcccaagatcctcggcctgtacgacgtggcctacacggatgaatccgggctgacc
gagctcatggacgccgccacggacacgctctccaacctcgacgtggttaaggagaagaag
ctcctggagaagttcatgaaggaactgattgcagagcgcggcctcgccgcctacggtgag
gactcagtcaggaccaaccttcagatgggcgccgtcgaggtgctgctgctctcggaggac
ctcaggaagagcaggctcacgatcaagtgccagagcggcagctgcgactacaccactacc
aagtcgatcaagtacagggtaggcgaaactccgaccgtgggcgagaggtgcccgaagtgc
cagtcgtctctcacaatatcggagaacatcgacatcgtcgaggagctctcgctgatcgcc
gagcagatgaacactgaggtagagttcgtcagcactgactttgaggaaggggagcagctg
tacaacgcgttcggcggcatcgcagccatactgcggtaccacacaggctcctaa
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