Methanocella arvoryzae: RCIX571
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Entry
RCIX571 CDS
T00526
Name
(GenBank) predicted transcription regulator
KO
K09714
HTH-type transcriptional regulator, fmd operon transcriptional regulator
Organism
rci
Methanocella arvoryzae
Brite
KEGG Orthology (KO) [BR:
rci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rci03000
]
RCIX571
Transcription factors [BR:
rci03000
]
Prokaryotic type
Helix-turn-helix
Other families
RCIX571
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFX_C
Sigma70_r4
HTH_3
GerE
HTH_31
HTH_19
HTH_7
DMAP1
DUF6823
HTH_23
UPF0122
Sigma70_r4_2
RepB_primase_C
DUF5069
HTH_37
Motif
Other DBs
NCBI-ProteinID:
CAJ35978
UniProt:
Q0W6L5
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All DBs
Position
2236964..2237371
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AA seq
135 aa
AA seq
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MAYKSFLTKRQLTVLRLRQAGLTQEEIAKRIKTTRANISLIEKRAKENIERSKETIKEWN
SVISPVRITVKKGTDVMTIPEIVFAEADRSGVHVRTDSIGLITLIKKEKSDAISNRMVVR
DFEVDITNSGEVTLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggcttataaatcattcctcaccaaacggcagcttactgtgcttcgcctgcgacaggca
ggcctcacccaggaagagatcgcgaagcgcattaagaccaccagggcgaatatcagcctc
atcgagaagagggcgaaggagaacatcgagcgctccaaagagacgatcaaagagtggaac
agcgtcatctctccagtccgcatcaccgtgaaaaaaggcacagacgtcatgaccatcccc
gagatcgtgttcgccgaggcggacaggtcaggcgtccatgtgcgcaccgactctatcggg
ctgatcaccctcatcaaaaaagagaagagcgacgccatatccaaccgcatggtagtccgg
gacttcgaagtggacatcaccaactccggagaagtgaccctgctttga
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