Rosa chinensis (China rose): 112172490
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Entry
112172490 CDS
T06020
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
112172490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112172490
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112172490
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
DASH_Duo1
Motif
Other DBs
NCBI-GeneID:
112172490
NCBI-ProteinID:
XP_024165622
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Position
1:65866667..65868766
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AA seq
365 aa
AA seq
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MDDHLLSEFFEEHDHCYGGGDASSLAPGDDLFSILDSLDAGSLMDSFPPPTPCDELVFSS
SKEGGIEVSPELETSPKSCKRVKLSKEASPGGTGSNSDDGQQRMSHITVERNRRKQMNEH
LTVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKAYSEVLSPRLPVSS
SPRLPSSPLVLSPRKPPISPLASPRISCSSLPISPRTPQPTSPYKPPRTTSLQQLQQPVY
LSSPTITAASSSLEPSPSNSSTTNFSSVNHVIDNLNELFANSKSAIAHVEVKFSGANVLL
NTVSPRIPGQALKIISALEDLSLEILHVEIKTEDEKMLNSFTIKIGIECQLSAEELAHQI
QQTFR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcatcttttgtctgaatttttcgaagaacacgatcactgctacggtggcggc
gatgctagcagcttggctcccggtgatgatctttttagcatattggatagcttagatgca
gggtcactcatggatagttttcctccgccaacaccgtgcgatgaactcgtgtttagctca
tcaaaagaaggagggatagaagtgtcaccggagctcgaaacttcaccaaaatcatgcaag
agagtgaagctttcaaaagaggcttccccaggcgggacaggttctaattctgacgatgga
cagcaaaggatgtcgcatataacggtggagcgcaaccggaggaagcaaatgaacgagcac
ttgacagtcttgcgctctctcatgccttgtttctatgtcaaaagaggggatcaagcatca
attattggaggggtggttgactacatcaatgaattgcagcaagttcttcaatcactagag
gccaagaagcaacgaaaggcatacagtgaagtgttaagccctaggctaccagtttcaagt
agtcccagattaccttcatcaccactagtacttagccctagaaaacccccaataagtcct
ttggcaagtcccagaatcagctgcagcagcttgcctattagtccaagaaccccacagcca
accagcccttacaagcctcccaggacgacgtcgttacaacagttgcaacaaccagtttac
ctctctagtccaaccataactgcagctagctcatcacttgaaccatctccttcaaattcg
tcgactactaatttttcctccgttaatcatgttattgacaatctcaatgagctttttgcc
aattctaagtccgccattgcccatgtggaagtgaagttttcaggtgcaaatgttctttta
aacacggtgtctcctcggataccaggacaagctctcaaaatcatttcggctctcgaagat
ctttccctcgagattctccacgtcgaaataaagacggaagacgaaaagatgcttaattcc
ttcaccatcaagattggaattgaatgccaacttagtgctgaggaactcgctcaccaaatt
cagcaaacattccgctaa
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