Rosa chinensis (China rose): 112179177
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Entry
112179177 CDS
T06020
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03022
Basal transcription factors
rcn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112179177
09124 Replication and repair
03420 Nucleotide excision repair
112179177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112179177
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112179177
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112179177
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112179177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
112179177
NCBI-ProteinID:
XP_024173287
LinkDB
All DBs
Position
7:complement(18727625..18729947)
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AA seq
70 aa
AA seq
DB search
MVNATKGLFISCDIPMAQFIINYNNSLPPSQKFIIHVLDGTHLFVQQHAAEMIRSAISEF
RDQNSYEKPT
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgctactaaaggattgtttatctcttgtgacatacctatggcgcaattcatc
atcaattacaacaattcactgcctccatcacaaaagttcataatacacgtcttggatggc
actcacttgtttgtgcaacagcatgcagctgagatgataagaagtgccatttcagaattt
agagaccagaattcttatgagaagcctacttga
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