Rosa chinensis (China rose): 112182013
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Entry
112182013 CDS
T06020
Name
(RefSeq) UV-stimulated scaffold protein A homolog isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
112182013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112182013
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
112182013
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
112182013
NCBI-ProteinID:
XP_024176210
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All DBs
Position
1:complement(51640475..51643021)
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AA seq
660 aa
AA seq
DB search
MEEEEEGGRGGGKVRVLIEKATESIEPEVDPSLLKAIKAVVRRSDSELRLAAHLLMDLMK
RDHSQVRYLTLLIIDELFMRSKLFRGLVVENMDQLLTLSVGFRRNLPLPAPANVAATLRL
KAIEFLEKWNASYGVHYRQIRLGFEYLKNTLKFQFPNLQANAARVQQERRERERKSKEIL
LKKFQSLERSFGSIKEEIQSTVDEIGECLEIARAKEEHSKFIPLDDEDFEEIHSYELRQL
RLQTLEEEDKIHENTENKVVFDALRELYKLLLTKHLVAVQEWITVLVRVELNDNRSRDSY
LKEFIDIQNHIQSVKKKCEESGCTLLNTANPDEEDFWEEGNIGSVETGSSSRPSNNIEDL
AGTSTCTSTCTSTSTFNEVKERISKAHGNVTNSKKTRSREGGVAKLDPLKSKLLAEAPEV
NWGSYLDNWGSKRDVLANHRGLELESHWGRVDQDAVIPADKIAELNLQATVYKEKQVDIP
PCRAPLSNGKLCQRKDLRICPFHGPIIPRDDEGKPLNQNPSMDETTLDTGATGDNLVEQL
AKQAVKNVREKDKELARKREIDKQALKRAKLAKVREHNDLVLRDAAMASTSRSAAIGEDL
EANPSSRNKKKTLAAMLKKKETPKDRLGQRLLNTRASAATVRQLTLGADTNYREAFPNQW
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagaagagggaggaagaggaggagggaaggttagggttttgatcgagaag
gcaacggagtcaatcgaaccagaggtcgaccccagcctcctcaaggcaatcaaggccgtc
gtccgccgctccgattccgagctccgactcgccgcccatcttctcatggacctcatgaag
cgcgaccactctcaggtgaggtatttaacgctgctgataattgatgagctttttatgcgg
tcgaagctgtttagaggccttgtggttgagaatatggatcagttgttgacgttaagcgtc
gggtttagaaggaatttgccactgccagctccggcaaatgttgcggctactctgcgtttg
aaggcgattgagtttttggagaagtggaatgcttcgtatggtgttcattataggcagatt
aggttagggtttgagtaccttaagaacacgcttaagtttcagttcccgaatctacaggca
aatgcggcgcgggttcagcaggagaggagggagagggagaggaagtcgaaggagattttg
ctgaagaagtttcagagtttggagaggagttttggatcaataaaggaagagatacaatcg
acggttgatgagattggggagtgtttagaaattgcacgtgctaaagaggaacattcaaag
tttattcctttagatgatgaagattttgaagagattcattcttatgagttacggcagttg
cgtttgcaaacgttggaagaagaagataaaattcatgagaatactgaaaacaaagtggtt
tttgatgcactcagggagctttacaagcttttgttaacaaagcatttggttgcggtccaa
gaatggataactgttcttgtaagggttgaactgaatgataacaggtccagagattcctat
ttgaaggagttcattgatatccagaatcatattcagtcagtcaagaagaagtgtgaagaa
tcaggttgcactcttctaaacactgcaaatcctgatgaagaagatttttgggaggaaggc
aatatcggatcagttgagactgggagttctagtcgtcccagtaacaacattgaagatctt
gctgggacatccacatgcacatctacatgtacatctacatctacattcaatgaggtaaaa
gagagaatttctaaagcacatggtaatgtgacaaacagcaaaaaaactcgcagtcgtgaa
ggtggtgtagccaagttagatcctctgaagagcaagcttttggctgaagctccagaggtg
aactggggctcttatttggataactggggttcaaagagagatgtattggctaaccaccgg
ggtttggagcttgaaagtcattggggcagagtagatcaggatgcagttatcccagcagat
aagattgcagagttaaatcttcaggctactgtatacaaagaaaagcaagttgatattcca
ccatgccgagctccattaagtaatggaaaactttgtcagagaaaagacttgagaatttgt
ccatttcatggacccattattcccagagatgatgaggggaagcctctgaatcagaaccct
tctatggatgagacaactctggatacaggggccacaggggacaatctagtagagcagttg
gcgaaacaagccgtgaagaatgttcgtgagaaagataaagagttagcaaggaagagagaa
attgataaacaggcactgaagcgtgcaaagcttgcgaaagtacgagaacacaatgatttg
gttttacgtgatgctgctatggcttcgacttctagatctgcagccattggcgaagatttg
gaggcaaacccatcatccagaaacaaaaagaaaacccttgcagccatgctgaagaagaaa
gaaacaccaaaagatagattaggtcagaggcttttaaacacacgagcgagtgctgccact
gtaagacagcttaccttgggggcggatactaattacagagaagccttcccgaatcagtgg
tga
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