Rosa chinensis (China rose): 112187835
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Entry
112187835 CDS
T06020
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112187835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112187835
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112187835
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
112187835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
112187835
NCBI-ProteinID:
XP_024182556
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All DBs
Position
2:72899902..72903772
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AA seq
287 aa
AA seq
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MVGLSIGEKYFIQGGIAQDLRTDGRKRLTPRPIFVETGVISQSNGSARVRIGATEVIASV
KAELGRPSALHPDKGKVSINVDCSPTAAPMFEGRGGEELSAELSVALQRCLLGGKSGSGA
GIDLSSLAIVEGKICWDLYIEGLVVSSDGNLLDALGAAIKAALSNTGIPRVNVAAGASGD
EQPEVDVSDEEFLQFDTSKVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGNIC
GLTKRGDAGLDPSVVLDMISVAQSVSERLINTLDSQIAAAEAGEDEL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggtgggattatctataggagagaagtatttcatacagggtggcattgctcaggacctt
cgcactgatggtcggaaaagattgacgcctagacccatctttgttgaaactggagtcatt
tcccagtcaaatggttcagcaagggtcaggattggtgccacagaagtcattgccagtgtg
aaggctgaacttggaaggccgagcgcattgcatcctgacaaaggaaaagtctctataaat
gttgattgcagtccaactgcagcaccaatgtttgagggtagagggggtgaggagctgtcc
gcagaactctcagttgctcttcagcgttgtctattaggtggtaaaagtggatcaggtgct
ggaattgacctctcttctctggcaattgtggaaggaaagatttgttgggatctttacatt
gaaggccttgttgttagttcagacggaaatctactagatgccctaggtgctgctattaag
gctgctttgagcaatacaggcatcccaagagtaaatgttgcagctggtgcatcaggagat
gagcaaccagaggttgacgtaagcgacgaggaatttctgcaatttgacacatccaaggtc
cctgtcattgttacattaacgaaggtaggcaggcactatattgtagatgccacatcagaa
gaggaatcccaaatgagctcagctgtttctatttcagtcaacaggcaagggaacatatgt
gggttgacaaaaaggggtgatgcaggcctagatccaagcgtcgttcttgacatgatatct
gtagcacaaagtgtaagtgagaggctgataaacacattggattctcagatagctgcggct
gaagctggtgaagatgagttgtga
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