KEGG   Rosa chinensis (China rose): 112190330
Entry
112190330         CDS       T06020                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112190330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcn03041]
    112190330
Spliceosome [BR:rcn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112190330
 Complex B
    112190330
 Complex C
   U2 SnRNP specific factors
    112190330
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 112190330
NCBI-ProteinID: XP_024185539
LinkDB
Position
1:complement(22951318..22955665)
AA seq 509 aa
MSSTLLEVTRGAHEEVERLERLIVKDLQNEPASGKERLAQSHRVRLMIDTVTSTTERLIE
IYEDNDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAALVVDANEEHEALL
KEEPQVEFSGEEAYGRYLDLHELYNQYINSKFGEPIEYSAYLDVFSQPHKIPRKLKSTRQ
YREYLENLVQYLVYFFHRTEPLQDLDRIFTKVETEFEEQWADGKVEEWENAIQDGEQVQD
QQTVIDLDYFSTVEELVELGPEKLKEALASLGLKIGGTVQQRAERLLLTKDTPLEKLDKK
HFAKGSHGSAQNGAAVAPQQVVMLKEIALLEAKLKKLSDLLSEAIERTKDNIVKKQALTY
EEIAAEREDEETQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NQSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAQELWKRIQARQGVNKWR
PDLEEEYEDREGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgctactggaggtgacgcgtggcgctcacgaggaggtggagcgcttggag
cgtttgatagtgaaggacttacagaacgagccggcgagcggcaaggaacgcttggctcag
agccaccgtgtccgcctcatgatcgacaccgtcacctccaccacagaaagactcattgag
atctatgaggataacgataatgcgaggaaggacgagattgcggctctcggaggccaaact
gccaccggcaccaatgtgttcagtgcattctatgatagattgaaagagatccgtgagtac
cataggagacatccagctgcactagttgtcgatgctaatgaagaacatgaagccctgctc
aaggaggagcctcaagtagagttcagtggagaggaagcttatggacgatacctggattta
catgaactgtacaatcagtatatcaattctaaatttggagagcccattgagtactctgct
tatcttgatgttttttcacaaccacataagattcctcggaagctcaagtctacaaggcag
tacagggaatatcttgaaaatctagttcagtatctggtatatttcttccaccggacagag
ccattgcaagatcttgatagaatattcacaaaggttgaaactgaatttgaagaacaatgg
gcagatggtaaggtagaagaatgggaaaatgcgattcaggatggtgaacaagttcaagat
cagcagactgttattgatcttgactattttagcacagtggaagaactggtggaattgggt
cctgaaaagctaaaggaggcattggcttcgttaggactgaagatagggggtaccgttcag
caacgtgcagagaggcttttacttacaaaggatacacctctggaaaagttggacaagaag
cattttgccaaagggtcacatggttcagcacagaatggggctgctgtagctccacagcaa
gttgtcatgttaaaagaaattgctctcttggaagccaaattgaaaaaactaagcgactta
ctgagtgaggctattgaacgaacaaaagacaacattgttaagaaacaggctttgacatat
gaagaaattgctgcagaacgtgaggatgaagagacacaggctgatactgaaagtgatgac
gatgagcagcagatttataatccactcaaattgccaatgggttgggatgggaagcccata
ccttactggctgtataagcttcatggtcttggtcaggaattcaagtgtgagatatgtggg
aatcagagttactgggggcgtagagcttttgagcggcattttaaggaatggcgccatcag
catggaatgcgttgccttggcataccaaacaccaagaacttcaatgagatcacatcaatt
gaggaagcacaagaattgtggaagaggatacaagcacggcaaggggtgaacaagtggcgc
ccggaccttgaagaagagtatgaagacagagagggcaacatctataataaaaagacatat
actgatctccagcgacagggactaatttaa

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