Rosa chinensis (China rose): 112195856
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Entry
112195856 CDS
T06020
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112195856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112195856
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
112195856
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112195856
Prokaryotic type
112195856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
KAR9
Motif
Other DBs
NCBI-GeneID:
112195856
NCBI-ProteinID:
XP_024191847
LinkDB
All DBs
Position
4:66563069..66565403
Genome browser
AA seq
363 aa
AA seq
DB search
MTFAVSGFGNFPANQIRALAPIHKAAYDHIIRVRGHSFAVANPKGAAMGSRAATKNKTLL
DIFQPTTRSAKRFKTDSSTPKSDDAITEPSSSPSALTPEQKSRIEFQKLLAKAKRNRTIC
SGRVSDSKAKGEGVKLEELLVEDTWLTALPSELKKPYAVNLSKFVESEISGAGGGGVPIY
PPSHLIFNALNSTPFDRVKAVILGQDPYHGPGQAMGLSFSVPQGVKVPSSLVNIFKELHK
DVGCSIPSHGNLEKWAVQGVLLLNAVLTVRDHQANSHAKKGWEQFTDAVIQTISKKKEGV
VFLLWGNSAQQKSRLVDVSKHHILRAAHPSGLSAYRGFFGCRHFSRTNQLLKEMGIPPID
WQL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgacctttgccgtttccggtttcggtaattttcccgccaatcagatacgagctttggcg
ccaattcacaaagcagcctatgatcatatcattagggtaagaggccattccttcgccgtc
gctaatcccaagggagcagcaatgggttccagagctgccaccaaaaacaaaaccttactg
gatatcttccaacccacgacccgatccgccaaacgcttcaaaaccgattcttccaccccc
aaatccgatgacgccatcaccgagccttcttcttctccgtcagccctcacccccgagcag
aagtcacgcatagaattccagaagctgctggccaaagcgaaacgcaaccgcactatctgc
tccggcagagtctccgattccaaggccaaaggtgaaggagtgaaattggaggagctattg
gtggaggacacgtggctgacggcgttgccttctgagcttaagaagccctacgccgtcaac
ctcagcaagttcgttgagagtgagatttccggcgccggcggtggtggtgttccgatatat
ccgccgagtcacttgatcttcaatgctctgaactccaccccttttgatcgggtcaaggct
gtcattttgggccaggacccgtatcatgggccgggtcaggctatgggtctgtccttctct
gttccccaaggagtgaaggtcccatcgagcctggttaatatattcaaggagcttcacaaa
gacgttggctgttcaattccatctcatggaaatctagaaaaatgggctgttcagggtgtt
ctgttgctcaatgctgttctcaccgttagggatcatcaggctaactctcatgcaaagaaa
ggatgggaacaatttacggatgctgttatccaaacgatttcaaaaaagaaggaaggagtt
gttttcctcctgtggggaaactccgcacagcagaaatccaggttagttgatgtgtcgaag
catcacattcttagagcggcacatccttccggtttatctgcatacaggggcttctttggc
tgcaggcatttttctcgcacgaaccagcttctcaaggagatgggtattcccccgatcgat
tggcaactttga
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