Rosa chinensis (China rose): 112197559
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Entry
112197559 CDS
T06020
Name
(RefSeq) tricalbin-3
KO
K28063
extended synaptotagmin
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112197559
Membrane trafficking [BR:
rcn04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
112197559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMP_MUG190-like
C2
PDZD8_N
MMM1
Motif
Other DBs
NCBI-GeneID:
112197559
NCBI-ProteinID:
XP_024194057
LinkDB
All DBs
Position
4:66599853..66604469
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AA seq
682 aa
AA seq
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MILQSVSASFDFSQQPLFVHCPCGNSAITNSSWVRSSAAGRRRKQVLIASYRRKGVRRKL
GFTACAISPDGSGTNNMNIEIANSTRRAAKNSVLKRFSSELDALDEFSDESQIQMGSNFT
GFQEDPFVNKLRTQLGVIHPMPSPPINRNIVGLFVFFFFVGVGFDKFWTSRKKSKRGSEN
GLREAWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRAGLENWLIGLLQPVIDNL
KKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLTLKFS
IIPIYVPVGVRDFDIDGELWVKLRLIPTAPWVGAVQWAFVSLPKIKFELSPFRLFNLMAI
PVLSMFLTKLLTEDLPRLFVRPKKSVLDFQKVKAVGPVGDDFKSGDMQEGNKDFVGELSV
TLVDARKLSYVFYGKTDPYVTLSLGDQIIRSKKNSQTTVIGPPGEPIWNQDFHMLVANPK
KQKLYVQVKDSLGFTDLSIGTGEVDLGSLQDTVPTDRIVVLQGGWGLFNKGSSGEILLRL
TYKAYVEDEEDDKTAADPNDTEDEDDELSDSDESSAYEKDKTESANETDKESFMDVLAAL
IVSEEFQGIVASETGNTKVSDDFSNTASKTSRLRGLDAESVPSNSNNSSEDSRGSPLFWL
AVITSISVLIAINVGGSSIFNP
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatcttacaatccgtttctgcgagtttcgacttctcgcagcagcctctttttgtgcac
tgcccatgtggaaattccgccattacaaacagcagttgggttcgttcttcagctgctgga
agaagaaggaagcaggtacttatagccagttatcggcgcaaaggcgttagaagaaaactg
ggttttactgcttgtgcgatttccccagatgggtcgggcactaataatatgaatatagag
attgcaaattcaactagaagggccgccaagaactcggtgctgaagcgtttttcaagtgaa
ttggatgcgctcgatgagttttcggatgagtcacagattcaaatgggttccaatttcaca
ggttttcaagaagacccttttgttaataagcttaggactcagctaggagtcatacaccca
atgccgtcgcctccgataaaccgaaacattgtggggttgtttgtcttcttcttttttgtg
ggggttgggtttgacaagttctggacttcaaggaagaaaagcaagcggggaagtgagaat
ggtctgagggaggcgtggccgcaagtgcctaccagcttctcattgtttttggagaaggat
ttgcagaggaaggagtcggtggaatgggtgaacatggttttggggaagctctggaaggtt
tacagagccgggcttgagaattggctcattggcttgcttcagccggttattgataacttg
aagaagcctgactatgttgagagagttgaaatcaagcagttttcgctgggggacgaacca
ttgtctgttaggaatgtcgaaaggagaacatcccgtcgtgtcaatgatctacagtaccaa
ataggtctacgttatactggtggagctcgtatgctgttaatgcttacactgaaatttagc
attattcccatttatgtgccagtcggtgttcgagattttgatattgatggagagctttgg
gtcaaattacggctaataccaacagcgccgtgggtgggagctgttcaatgggcttttgtc
tcacttcccaagatcaaatttgaattgtcaccattccgcttgttcaacttaatggcaatc
cctgttctatcaatgtttttgactaaacttctcacagaggatttacctagactatttgta
cgcccaaaaaagagtgttttggatttccagaaagtaaaagcagttggccctgtaggagat
gatttcaagtcaggggacatgcaagaaggaaacaaggattttgttggagaattatcagtg
acccttgtagatgctcggaagctttcctatgtcttttatggcaaaacagatccatatgtt
acgctaagcttgggtgatcagattataagaagtaaaaagaacagtcaaactactgttatt
gggcctcctggtgaaccaatttggaatcaggattttcatatgcttgtagcgaaccctaaa
aagcaaaaactatacgtccaagtcaaggattctcttggattcacagacttatctattggt
acaggagaggttgatcttggatctcttcaagacactgtaccaacagacaggattgtggta
ctccaaggaggttggggactgtttaataaggggtcttctggtgagatactactacgactg
acgtataaagcgtatgttgaagatgaagaggatgacaaaactgcagcggatcctaatgat
actgaagatgaagatgatgagttgtctgattctgatgaatcaagtgcttatgagaaggat
aaaacggagtctgcaaatgaaacagacaaagagtcctttatggatgttctagcagcttta
atcgtgagtgaggaatttcaagggatagtggcaagcgaaacaggaaataccaaagtttca
gacgatttctccaatacagcttcaaaaacgtctagattacgtggtcttgatgccgaatca
gtgccttcaaattctaataatagttctgaagattctcgaggctcacccttattttggctc
gccgtaattaccagcatatcggtactaattgctatcaacgtcggtggttcaagtattttc
aatccttga
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