Rosa chinensis (China rose): 112202218
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Entry
112202218 CDS
T06020
Name
(RefSeq) meiotic recombination protein SPO11-1 isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112202218
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
112202218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
JetD_C
Motif
Other DBs
NCBI-GeneID:
112202218
NCBI-ProteinID:
XP_024198927
LinkDB
All DBs
Position
5:56177136..56182940
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AA seq
525 aa
AA seq
DB search
MEGKRSRGRSQPRPRHLLTKIKEFTRALVKDLSDGRSPEILIHRFRNYCSNPSANCFCSS
DLPKGKETLTLRKETHVHRLDVLLRVLVIVQQLLQENRHGSKRDIYYMHPSIFSDQSVVD
RAINDICILLQCSRHNLNVVSVGKGLVMGWLRFAEAGNMFDCINRPNTAYPVPVHVEEVK
DIVSVAQYILVVEKESVFQRLANDQFCNTNHCIVITGRGYPDISTRRFLGLLVDTLHIPV
YCLVDCDPYGFDILSTYRFGSLQMAYDAKFLRVPEIIWLGAFPLDSEKYHLPHQCLLPLT
AEDKRKTEAMLQRCYLEREVPQWRLELQLMLERGVKFELEALSVHELSFLSTEYIPSKIQ
GAYSIDIDAEQSMVKVSGKVNPKIILQVLGGKHAKVKSVKFDSEEPSMGGGYPPPPPPLL
PPYGMGLGPHPYSYPNGGPYDYPMMMPPLLMLPPSPPPPPPSVAAQPQQKPTLLLEAPPQ
NSGATAQPQNSGTSAPPTTNVAEEAVIPSDKKSKRCGIVKNCSIM
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaagcggtcaagagggaggtcacagccccgtccccgccatttgctaacaaaa
atcaaagaatttactcgggctcttgtgaaagatctcagcgacggacggtcaccggagatt
ctcatccatcgcttccgaaattactgctccaatccctccgcaaattgcttttgtagctct
gatttgccgaaagggaaggagacgctcacacttcggaaagaaacccatgttcatagatta
gatgttctgcttagggttcttgtaattgttcagcaacttctgcaagaaaacagacatggg
tctaagagagatatctattacatgcacccttctatattttcagatcagtcagttgtagac
cgtgcaatcaatgacatatgcatccttctgcagtgtagtcgccacaatttgaatgtggtg
tctgtaggaaaggggttggtaatgggctggttaaggttcgcagaggctggaaacatgttt
gattgcataaatagaccaaacactgcttaccctgttccagttcatgttgaagaggtcaaa
gatattgttagtgttgcccagtacatacttgttgtggaaaaagaatcagtttttcaacga
ttggcaaatgaccagttttgtaacacaaaccactgcattgtcatcactggacgtggatat
cctgatatttccacaagaaggtttttggggctccttgttgatactttacatatccctgtc
tattgcttggtagattgtgatccctacggttttgacatcttgtccacatatcggtttggt
tctctgcaaatggcgtatgatgcaaaatttctacgggtccctgagataatctggcttgga
gccttccctttggactctgagaagtaccatcttccacaccagtgtctccttcctttgact
gcagaagacaagaggaaaactgaagccatgttacagagatgctacttagaaagagaagtg
ccacagtggagattggagctacagttgatgctggaaagaggcgtgaaatttgagctagaa
gcattgtctgtgcatgaactttcctttttgtcgaccgagtacataccatcaaaaattcaa
ggtgcttattcaatagacatagatgcagaacaatcgatggtaaaagtttcaggcaaagta
aatccaaagataattctacaggtgcttggagggaaacatgccaaggtaaaaagtgtcaag
tttgatagtgaggaaccgtccatggggggcggttatccccctccccctccccctcttctt
cccccatacggaatggggctggggccccatccctattcctatccgaatggagggccatat
gactaccccatgatgatgccaccacttctgatgctgccaccatcaccaccaccaccacca
ccatcagtggcagcacaacctcaacaaaaaccaacattactattagaagcaccaccccag
aattcgggggccacagcacaaccacaaaattcaggaacgtcagcaccaccaaccactaat
gttgcagaggaggcagtgataccctcagataagaagtctaagcgttgcggcatcgtcaag
aattgcagcattatgtga
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