Rosa chinensis (China rose): 121050633
Help
Entry
121050633 CDS
T06020
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121050633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
121050633
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
121050633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Brr6_like_C_C
Motif
Other DBs
NCBI-GeneID:
121050633
NCBI-ProteinID:
XP_040367321
LinkDB
All DBs
Position
7:complement(24172365..24177445)
Genome browser
AA seq
1080 aa
AA seq
DB search
MFDFSLPIASRTRKGQERVYKEFNEKKKQKKKNEGGSAPNDFEKLGSECIVLSDDSMEDV
DSEGSDLEKSEGSEKVGKGGSVEVGGVETSTRLGVDLSADSVADLDDGDSEGVKVISLVS
DSDDEEVSINEEAGGGDSDGDKDSDSRSVGSDDEHNVYLADDDDDDEDDIESISSDDDAS
KYLNNERPVNLDCETEDAERSGGEGEKVGICQKRKRNIGEDGQKFNCVAHRTRSRSTSHS
SGHDDQRDDVDNNHCSSQTNRHPKMNSKCNNRRSCDNDETYACSLNNGRDKWNYVQKASQ
KNEGLRKLTKKKCTRVKKDASAYKILADSIYEDGELLPEGSASFGDKAVKNGTLPLKFSF
GEPPSIVPVEKSDCEKELENLFKEMEFAIRSAQIGSTDSSEVEINDTVPPVKEVTQHMLC
SQGKHHLILDEEIGLICKFCPHVHQEIKYIVPEFAPNPYGRSGRRFYEEDNRSIPVELQC
HDSGSGFNSHAHVDGTVWDLIPGVKSSVYPHQRAGFEFIWSHIAGGIHLEKLQKTSSADG
GGGCIISHAPGTGKTRLTIVFLQAYMRFNPKCRPLIIAPRTMLLTWEEEFKKWGFDVPFH
NLNNQNLSGKENKAALKILVQDGGQRHVKSVDGSRWLKLYSWKKERSILGISYRLFEKLS
TAHNSGGKKAYLAKTMRNILLDFPGIVVFDEGHTPRNDKSHMWKASSNIKTHRRIILSGT
PFQNNFDELYNTICLARPDWIRPTCSGRSLKRNVVKAQQTSPAKYITKGAGDKAKQAEEI
GARIAPVVHVYRGSILRDTLPGLRNSIVVLQPSKLQKEISTRIQERKDLPFFKDEHYETL
ISVHPSALLNLEKEKRVSLLNQVDLERLKEKRLNPESGMKAKFVIELVRLSDAMNERVLV
FSQYINALTFLRELLKSQFQWTEGEEILYMYGADDEKQRQTSMKAFNDPSSRAKVLLAST
KGCNEGINLVGASRVVLLDVTWNPSVERQAISRAYRLGQKKIVFIYHLLIAGAREEDKHS
RQVEKHHLSELVFSCSDMEAAKKIPAAVAEDKILEEMVQHEKLKHIFEKITLLDEASCYD
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactttagcttgcctatagctagtagaacaaggaaggggcaggagagagtttac
aaggagttcaatgaaaaaaagaagcagaagaagaagaatgagggtggctcggcgcccaat
gattttgagaaattggggtctgaatgcatagttctttcggatgatagcatggaggatgtc
gattcagagggttctgatttagaaaagagtgagggaagtgagaaggtggggaaagggggg
agtgtggaggttgggggtgttgagacaagtacaaggttaggagtggatttgtcagccgat
tctgtagctgatttggatgatggtgacagtgaaggtgtgaaagtcattagtttggttagt
gatagtgatgatgaggaggtgtcaataaatgaagaggcaggtggaggagactctgacggc
gataaggatagtgattcgaggagtgtaggttcggacgatgaacacaatgtgtacttggct
gatgatgatgatgatgatgaagatgatattgaaagcatctcttcagatgatgatgcaagt
aagtatttgaataatgagcgaccggttaatttagattgtgaaactgaggatgcggagaga
agtggaggagagggagaaaaggttggtatttgtcaaaagagaaagagaaacattggagag
gatggtcaaaagttcaattgtgtagcacaccgtactcggtcacggtctacaagtcattct
tctggccatgatgatcagagggatgatgttgataacaatcactgcagtagtcagacaaat
aggcatcctaaaatgaattcaaagtgcaacaatagaagaagttgtgacaatgatgagacc
tatgcttgcagtctgaacaatgggcgtgataaatggaattatgtgcagaaagcatctcaa
aagaatgaagggctgaggaagcttactaagaaaaagtgcaccagggtaaaaaaagatgct
agtgcttacaaaattctagcagattcgatttatgaggatggagaattgctcccagaaggg
tcagcttccttcggggataaagccgttaaaaatggaactcttccgttgaagttctcattt
ggtgagccgccaagtattgttccagtagagaagtcagattgtgagaaagaactagagaac
ctttttaaagaaatggaatttgctattagatctgctcagattggttctactgactctagt
gaggttgaaattaatgacacagtccctccagttaaggaagttactcagcatatgctttgt
agtcaagggaaacatcatcttatacttgatgaagaaattggactgatttgcaaattttgc
cctcatgtgcatcaggagatcaagtatattgtaccagaatttgctccaaacccttatgga
cgatctggcaggagattttatgaagaagacaaccggtctattcctgttgagctacaatgt
catgactctgggtctggctttaattcccatgctcatgttgatggcacggtatgggactta
attcctggtgttaaaagtagtgtgtatcctcatcagcgtgcaggttttgaatttatttgg
agtcatatagccggtggaattcatcttgaaaagttgcagaagacaagtagtgctgatggt
gggggtggatgcataatatcacatgcacctggaacagggaagacacgtctgaccattgtc
tttcttcaggcatacatgagatttaacccaaaatgcaggccacttataatcgctcctcgt
accatgcttctcacctgggaagaggagtttaaaaaatggggcttcgatgttccctttcac
aatctcaacaatcagaatttatccgggaaggagaataaagcagctctcaagattttggtg
caagatggaggccagcgccatgtgaaaagtgtggatggtagtcgttggttgaagttatat
tcctggaaaaaggaaagaagcatccttggaattagttacagactttttgagaaactttct
actgcgcataattctggaggcaagaaagcttacctagctaagacaatgaggaatattcta
ttagactttcctggtattgtagtctttgatgaagggcatacacctcgaaatgataagagt
catatgtggaaggcttcatcaaatatcaaaacacatagacgtattattctctcaggaact
ccttttcaaaacaattttgatgagctgtacaatacaatttgcttggcaaggccagactgg
atcaggcctacatgcagtggacgaagcctaaaaagaaatgtagtgaaagcgcaacagacg
tctccggccaaatacattaccaaaggtgccggtgataaagcaaaacaagctgaggaaata
ggagctagaattgccccagttgtgcatgtttacagaggttccatattacgagatacactt
cccgggttgaggaactcgattgttgttttacagccaagcaagttacagaaagaaatttct
acaagaattcaagagaggaaggatcttccattctttaaagatgaacattacgagacttta
atatctgttcatccttcggctttgctgaacctggagaaggaaaagagggtatccttgctt
aatcaggtcgacttggagaggttaaaggaaaaaagattaaatcctgaatctgggatgaag
gcaaagtttgtgattgaactcgtacggcttagtgatgctatgaatgaaagagttctggtg
ttcagtcagtatattaatgccttgacctttttaagggagcttttgaaatctcagtttcaa
tggactgaaggggaagagattctttatatgtatggagcagatgatgaaaagcagcgccaa
acatcaatgaaggctttcaatgatccatcaagcagagccaaggtattattagcctcaacg
aaaggttgtaacgaaggaataaatttagttggagcttcaagggttgtgctgcttgatgtt
acatggaacccatctgttgagaggcaagctatatcccgagcataccgattgggacagaag
aaaatagtgttcatctaccatcttctcattgctggggcaagagaagaggataaacacagt
aggcaagttgagaagcatcatctgtctgaattggtattttcttgttcagatatggaagct
gccaagaaaatcccagctgcagttgcagaggacaagattttggaagagatggttcagcat
gagaaactcaagcatatatttgaaaagataacattactggatgaagcctcatgttatgac
taa
DBGET
integrated database retrieval system
