Rhodobacter capsulatus: RCAP_rcc02875
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Entry
RCAP_rcc02875 CDS
T01213
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00540
Lipopolysaccharide biosynthesis
rcp01100
Metabolic pathways
rcp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RCAP_rcc02875 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rcp01005
]
RCAP_rcc02875 (kdsA)
Enzymes [BR:
rcp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
RCAP_rcc02875 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
rcp01005
]
Lipid A
RCAP_rcc02875 (kdsA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
ADE86604
UniProt:
D5APN5
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All DBs
Position
3071947..3072780
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AA seq
277 aa
AA seq
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MKNVTIGRLTVANDLPLTVIAGPCQLESLPHALMIAEVMAEACAAAGAQFVFKGSFDKAN
RTSLKGKRGVGLEAGLAILDTVRAKLGCPVLTDIHDPEQARIAAQVVDVIQIPAFLCRQT
DLLIAAGETGRVVNIKKGQFLAPWDMPNVAEKVASTGNEKILLTERGTSFGYNTLVADMR
GLPVMAKTGYPVIMDATHSVQQPGGLGGASGGQREMAPVMARAAVSLGIAGVFIETHEAP
DTAPSDGPNMIPLDQMPKLIATLMAFDRLAKADPIRL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgtgacgatcggccgcctgacggtggccaacgacctgcccctgacggtgatc
gcggggccctgccagctggaaagcctgccgcatgcgctgatgatcgccgaggtgatggcc
gaggcctgcgccgcggcgggggcgcaattcgttttcaagggcagtttcgacaaggcgaac
cgcaccagcctgaagggcaagcgcggggtcggccttgaggccggtctggcgatcctcgac
acggtgcgggcgaagctgggctgcccggtcctgaccgacatccacgacccggaacaggcg
cggatcgcggcgcaggtggtcgatgtgatccagatcccggcgtttttgtgtcggcagacc
gatcttctgatcgcggcgggcgaaaccggccgggtggtcaacatcaagaaggggcagttc
ctggcgccctgggacatgccgaacgtggcggaaaaggtcgcctcgaccggcaatgaaaag
atcctgctgacggaacgcggcacgtcctttggctacaacacgctggtggccgacatgcgc
gggctgccggtgatggcgaagaccggctatccggtgatcatggatgcgacgcattcggtg
cagcagccgggcgggcttggcggcgcctcgggcgggcagcgcgagatggcgccggtgatg
gcgcgcgcggcggtcagccttggcatcgccggggtcttcatcgagacgcacgaggccccc
gacaccgcgccctcggacgggccgaacatgatcccgcttgaccagatgccgaagctgatc
gcgacgctgatggcctttgaccggctggccaaggccgacccgatccggctgtaa
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