Rhodococcus coprophilus: NCTC10994_00240
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Entry
NCTC10994_00240 CDS
T06666
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit b uvrb
KO
K03702
excinuclease ABC subunit B
Organism
rcr
Rhodococcus coprophilus
Pathway
rcr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10994_00240 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcr03400
]
NCTC10994_00240 (uvrB)
DNA repair and recombination proteins [BR:
rcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10994_00240 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC10994_00240 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_5
AAA_19
UvrD-helicase
DUF87
Helicase_RecD
UPF0730
UB2H
AAA_7
AIG1
Motif
Other DBs
NCBI-ProteinID:
SQI28495
UniProt:
A0A2X4WNK5
LinkDB
All DBs
Position
1:250974..253133
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AA seq
719 aa
AA seq
DB search
MAFASEHPVVAHSEFRPVGEIERTDARFEVVSEYEPAGDQPAAIDELERRLKAGEKDVVL
LGATGTGKSATTAWLIERLQRPTLVMAPNKTLAAQLANELREMLPNNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINDDVERLRHSASSSLLSRRDVVVVASVSCIYGLGTPQSYLDR
SIQLEVGLEVPRDALLRLLVDVQYNRNDLAFTRGSFRVKGDTVDIIPAYEELAVRIEFFG
DEIEALYYLHPLTGDVVRKVDSLRIFPATHYVAGPERMERAVKDIEAELEERLADLENRG
KLLEAQRLRMRTQYDLEMIRQVGFCSGIENYSRHIDGRPAGSAPATLIDYFPEDFLLVID
ESHVTVPQIGAMYEGDMSRKRNLVEFGFRLPSAVDNRPLTWEEFASRIGQTVYLSATPGP
YELGRTGGEFVEQVIRPTGLVDPKVVVKPTKGQIDDLIHEIRERADRDERVLVTTLTKKM
AEDLTDYLLELGIRVRYLHSDIDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSSTSLIQTIGRAARNVSGEVHMYADKITDSMARAIDETDRRREKQIAY
NKEHGLDPQPLRKKIANIMDQVYQEAEDTEAIEVGGSGRNASRGRRAQGESGRATSSGVI
EGRDTTTMPRAELADLVQQLTDQMMQAARDLQFELAGRLRDEIADLKKELRGMDAAGLK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgctagtgagcatcccgtagtcgcccattccgagttccgtccggtgggcgag
atcgaacgcaccgacgcccggttcgaggtcgtcagcgaatacgaacccgccggcgaccag
cccgccgcgatcgacgaactcgagcgcaggctgaaggcaggggagaaggacgtcgtactg
ctcggcgcgaccggtaccggcaagtccgcgaccaccgcctggctcatcgagcgactccag
cgccccaccctggtgatggcccccaacaagaccctcgccgcgcagctcgccaacgagttg
cgggaaatgctgcccaacaacgcggtcgagtacttcgtgtcgtattacgactactaccag
cccgaggcgtacatcgcgcagaccgacacctatatcgagaaggactcgtcgatcaacgac
gacgtggagcggttgcgtcactcggcgagttcgtcgctgctctcccgtcgagatgtcgtg
gtggtcgcctccgtgtcctgcatctacggcctcggcaccccgcagtcgtacctcgaccgt
tccatccagctcgaagtgggcctcgaagttcctcgcgacgccctgctgcgactgctcgtc
gacgtgcagtacaaccgcaacgacctcgccttcacacgcggctcgttccgcgtcaagggc
gacaccgtcgacatcattccggcctacgaggaactcgcggtacgcatcgagttcttcggc
gacgagatcgaggcgctgtactacctgcacccgcttaccggagatgtcgtccgcaaggtc
gattctctgcggatcttccccgcaacccactacgtcgcggggcctgagcggatggaacgc
gcggtcaaggacatcgaagccgaactcgaggaacgcctcgccgacctcgagaaccgcggc
aagctcctcgaggcgcagcgactgcggatgcgcacccagtacgacctcgaaatgatccgg
caggtcgggttctgctccggcatcgaaaactactcccggcacatcgacggccggcccgcc
ggttccgcaccggccaccctgatcgactactttccggaagacttccttctcgtcatcgac
gagtcgcacgtgacggtgccccagatcggcgcgatgtacgaaggcgacatgtcgcgcaag
cgcaacctcgtcgagttcgggttccgtctgccctcggccgtcgacaaccgtccgctcacc
tgggaggagttcgcctcccggatcgggcagaccgtgtacctgtcggcgacgcccggcccg
tacgaactcggacggaccggcggcgagttcgtcgaacaggtcatccggccgaccggtctg
gtcgacccgaaggtcgtcgtcaaacccaccaagggccagatcgacgacctgatccacgag
atccgggagcgcgccgaccgcgacgaacgtgtcctcgtcacgacgctgaccaagaagatg
gccgaggacctcaccgactacctgctcgaactgggcatcagggtgcggtacctgcactcc
gacatcgacacgttgcgccgagtggagctgctccggcagctgcgactgggagagtacgac
gtcctcgtcggcatcaacctgctgcgtgagggactcgaccttccggaagtgtcgctcgtc
gcgatcctcgacgcggacaaggaaggcttcctccgttcgagcacgtcgctgatccagacg
atcggacgcgcggcgcgcaacgtctccggcgaagtgcacatgtacgcggacaagatcacc
gattcgatggcccgtgccatcgacgagacggaccgccggcgcgaaaagcagatcgcttac
aacaaggagcacggtctcgacccgcaaccgttgcgcaaaaagatcgccaacattatggac
caggtgtatcaggaagccgaggacaccgaagccatcgaggtcggcggatcgggccgcaat
gcgtcgcggggacgtcgcgcccagggcgaatcgggacgcgcgacaagctccggcgtcatc
gaaggtcgcgacaccacgacgatgccgcgcgccgaactggccgatctcgtgcagcaactc
accgaccagatgatgcaggccgcacgcgatctgcagttcgagctggcgggccggttgcgt
gacgagatcgccgatctcaagaaggaattgcgcggaatggacgcggccggactcaagtag
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